☰ Navigation Tabs
CryoEM structure of the type IV pilin PilA5 from Thermus thermophilus
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 15.015 f_angle_d 0.814 f_chiral_restr 0.048 f_bond_d 0.004 f_plane_restr 0.004
Sample Thermus thermophilus wide pilus
Specimen Preparation Sample Aggregation State FILAMENT Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method HELICAL Number of Particles 475441 Reported Resolution (Å) 2.63 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type HELICAL Axial Symmetry C1 Axial Rise 11.25 Angular Rotation 84
Map-Model Fitting and Refinement Id 1 Refinement Space REAL Refinement Protocol FLEXIBLE FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 47.6
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 1500 Maximum Defocus (nm) 4000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cryoSPARC CTF CORRECTION cryoSPARC MODEL FITTING Coot MODEL FITTING UCSF ChimeraX MODEL FITTING ISOLDE MODEL REFINEMENT PHENIX 1.20.1_4487: FINAL EULER ASSIGNMENT cryoSPARC RECONSTRUCTION cryoSPARC
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 2763060