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Human Carbonic Anhydrase IX mimic in complex with Lasamide (2,4-Dichloro 5-sulfamoyl benzoic acid)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 296 1.5 M sodium citrate, 50 mM Tris-HCl (pH 7.5)
Crystal Properties Matthews coefficient Solvent content 2.71 54.64
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 157.33 α = 90 b = 157.33 β = 90 c = 157.33 γ = 90
Symmetry Space Group I 4 3 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2023-06-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ELETTRA BEAMLINE 11.2C 0.9718 ELETTRA 11.2C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.91 78.665 100 0.127 0.128 1 44.4 58.3 26027
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.91 1.943 2.644 2.667 0.788
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.91 78.665 26009 1282 99.985 0.194 0.1924 0.2008 0.2198 0.2306 RANDOM 34.238
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 18.519 r_dihedral_angle_6_deg 16.72 r_dihedral_angle_3_deg 14.68 r_lrange_it 7.388 r_lrange_other 7.38 r_dihedral_angle_1_deg 7.301 r_scangle_it 6.255 r_scangle_other 6.253 r_scbond_it 4.174 r_scbond_other 4.172
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 18.519 r_dihedral_angle_6_deg 16.72 r_dihedral_angle_3_deg 14.68 r_lrange_it 7.388 r_lrange_other 7.38 r_dihedral_angle_1_deg 7.301 r_scangle_it 6.255 r_scangle_other 6.253 r_scbond_it 4.174 r_scbond_other 4.172 r_mcangle_other 3.84 r_mcangle_it 3.839 r_mcbond_it 2.963 r_mcbond_other 2.958 r_angle_refined_deg 1.558 r_symmetry_nbd_refined 0.542 r_angle_other_deg 0.532 r_nbd_other 0.265 r_symmetry_nbd_other 0.207 r_nbd_refined 0.199 r_nbtor_refined 0.183 r_xyhbond_nbd_refined 0.152 r_symmetry_xyhbond_nbd_refined 0.112 r_symmetry_nbtor_other 0.088 r_chiral_restr 0.072 r_metal_ion_refined 0.062 r_gen_planes_refined 0.009 r_bond_refined_d 0.008 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2081 Nucleic Acid Atoms Solvent Atoms 68 Heterogen Atoms 17
Software Software Software Name Purpose REFMAC refinement XSCALE data scaling XDS data reduction REFMAC phasing