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Solution NMR Structure of Alpha-Synuclein 1-25 Peptide in 50% TFE.
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 1 mM aSyn_1-25, 20 mM potassium phosphate, 10 % [U-100% 2H] D2O, 50 % [U-2H] 2,2,2-Trifluoroethanol trifluoroethanol/water 20 mM 6.5 1 atm 298 Bruker AVANCE NEO 600 2 2D 1H-13C HSQC 1 mM aSyn_1-25, 20 mM potassium phosphate, 10 % [U-100% 2H] D2O, 50 % [U-2H] 2,2,2-Trifluoroethanol trifluoroethanol/water 20 mM 6.5 1 atm 298 Bruker AVANCE NEO 600 3 2D 1H-1H TOCSY 1 mM aSyn_1-25, 20 mM potassium phosphate, 10 % [U-100% 2H] D2O, 50 % [U-2H] 2,2,2-Trifluoroethanol trifluoroethanol/water 20 mM 6.5 1 atm 298 Bruker AVANCE NEO 600 4 2D 1H-1H COSY 1 mM aSyn_1-25, 20 mM potassium phosphate, 10 % [U-100% 2H] D2O, 50 % [U-2H] 2,2,2-Trifluoroethanol trifluoroethanol/water 20 mM 6.5 1 atm 298 Bruker AVANCE NEO 600 5 2D 1H-15N HSQC 1 mM aSyn_1-25, 20 mM potassium phosphate, 10 % [U-100% 2H] D2O, 50 % [U-2H] 2,2,2-Trifluoroethanol trifluoroethanol/water 20 mM 6.5 1 atm 298 Bruker AVANCE NEO 600 6 2D 1H-13C HSQC aliphatic 1 mM aSyn_1-25, 20 mM potassium phosphate, 10 % [U-100% 2H] D2O, 50 % [U-2H] 2,2,2-Trifluoroethanol trifluoroethanol/water 20 mM 6.5 1 atm 298 Bruker AVANCE NEO 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE NEO 600
NMR Refinement Method Details Software molecular dynamics CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS 1.21 Brunger, Adams, Clore, Gros, Nilges and Read 6 data analysis DANGLE 1.1 Cheung MS, Maguire ML, Stevens TJ, Broadhurst RW 2 structure calculation ARIA 2.3.2 Linge, O'Donoghue and Nilges 3 chemical shift assignment CcpNmr Analysis 2.4.2 CCPN 8 chemical shift assignment AnalysisAssign 2.5.2 CCPN 4 peak picking CcpNmr Analysis 2.4.2 CCPN 5 collection TopSpin 4.1.3 Bruker Biospin 7 processing TopSpin 4.1.3 Bruker Biospin