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HPV16 E6-E6AP-p53 complex
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4XR8
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 4.895 f_angle_d 0.649 f_chiral_restr 0.042 f_plane_restr 0.005 f_bond_d 0.004
Sample Ternary complex of HPV16 E6, E6AP, and p53 Sample Components HPV16 E6 - MBP Fusion p53 E6AP
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 105794 Reported Resolution (Å) 3.38 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 80.5
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 1500 Maximum Defocus (nm) 2500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version MODEL FITTING UCSF Chimera MODEL REFINEMENT REFMAC RECONSTRUCTION cryoSPARC
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 2349301