8D40

Crystal structure of human CELSR1 EC1-4

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP	8.5	277	3 M Sodium Chloride, 0.1 M Tris pH 8.5

Crystal Properties
Matthews coefficient	Solvent content
6.46	80.96

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 305.653	α = 90
b = 90.356	β = 96.166
c = 94.949	γ = 90

Symmetry
Space Group	C 1 2 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS EIGER X 16M		2020-11-01	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	APS BEAMLINE 24-ID-E	0.9798	APS	24-ID-E

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	3.55	47.244	98.7	0.993	10.094	5.7		31176

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	3.55	3.61	98.2		0.768	2.5	5.3

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	5v5x, 5w4t, 3q2v, 3q2w	3.554	47.244	30766	1483	98.209	0.217	0.2157	0.2523	123.797

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-14.574		-7.28	14.088		2.011

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	35.694
r_dihedral_angle_3_deg	18.291
r_dihedral_angle_4_deg	17.05
r_lrange_it	15.352
r_lrange_other	15.351
r_dihedral_angle_1_deg	9.505
r_scangle_it	9.218
r_scangle_other	9.217
r_mcangle_other	8.273
r_mcangle_it	8.271
r_scbond_it	5.777
r_scbond_other	5.777
r_mcbond_it	5.326
r_mcbond_other	5.317
r_angle_refined_deg	1.932
r_angle_other_deg	1.299
r_metal_ion_refined	0.327
r_nbd_other	0.289
r_nbd_refined	0.272
r_symmetry_nbd_refined	0.22
r_symmetry_nbd_other	0.211
r_xyhbond_nbd_refined	0.18
r_nbtor_refined	0.178
r_symmetry_nbtor_other	0.085
r_chiral_restr	0.072
r_symmetry_xyhbond_nbd_refined	0.047
r_bond_refined_d	0.01
r_gen_planes_refined	0.008
r_gen_planes_other	0.002
r_bond_other_d	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	6647
Nucleic Acid Atoms
Solvent Atoms	8
Heterogen Atoms	18

Software

Software
Software Name	Purpose
REFMAC	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHASER	phasing