8BTQ

Small molecule stabilizer for 14-3-3/ChREBP (Cmd1-soaking)


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP2770.095 M HEPES pH = 7.5 27% PEG400 0.19 M CaCl2 5% glycerol
Crystal Properties
Matthews coefficientSolvent content
2.3647.79

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 81.979α = 90
b = 111.932β = 90
c = 62.339γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS EIGER X 16M2021-11-04MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONPETRA III, DESY BEAMLINE P111.033220PETRA III, DESYP11

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.645.4199.90.9992612.938129
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.61.630.959

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT4JC31.645.4136253185699.810.173050.171680.19921RANDOM17.901
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.390.3-0.69
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg13.429
r_long_range_B_refined7.876
r_long_range_B_other7.772
r_scangle_other6.774
r_dihedral_angle_1_deg5.597
r_scbond_it5.11
r_scbond_other5.108
r_mcangle_it4.131
r_mcangle_other4.129
r_dihedral_angle_2_deg4.077
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg13.429
r_long_range_B_refined7.876
r_long_range_B_other7.772
r_scangle_other6.774
r_dihedral_angle_1_deg5.597
r_scbond_it5.11
r_scbond_other5.108
r_mcangle_it4.131
r_mcangle_other4.129
r_dihedral_angle_2_deg4.077
r_mcbond_it2.957
r_mcbond_other2.914
r_angle_refined_deg1.31
r_angle_other_deg0.526
r_chiral_restr0.061
r_bond_refined_d0.014
r_gen_planes_refined0.007
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1998
Nucleic Acid Atoms
Solvent Atoms222
Heterogen Atoms26

Software

Software
Software NamePurpose
REFMACrefinement
DIALSdata reduction
Aimlessdata scaling
MOLREPphasing