8BA1
CTD12-CTD12 heterodimer from CPSF73 and CPSF100
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H NOESY | 458 uM CPSF73, 458 uM CPSF100, 20 mM TRIS, 150 mM sodium chloride, 2 mM DTT | 100% D2O | 150 mM | 7.5 | 1 atm | 298 | Bruker AVANCE NEO 700 |
2 | 3D 1H-13C NOESY aliphatic | 625 uM [13C-Ile; U-15N] CPSF73, 625 uM [13C-Ile; U-15N] CPSF100, 20 mM TRIS, 150 mM sodium chloride, 2 mM DTT | 90% H2O/10% D2O | 150 mM | 7.5 | 1 atm | 298 | Bruker AVANCE NEO 700 |
3 | 3D 1H-13C NOESY aliphatic | 694 uM [13C-Val/Leu, U-15N] CPSF73, 694 uM [13C-Val/Leu, U-15N] CPSF100, 20 mM TRIS, 150 mM sodium chloride, 2 mM DTT | 90% H2O/10% D2O | 150 mM | 7.5 | 1 atm | 298 | Bruker AVANCE NEO 800 |
4 | 3D 1H-13C NOESY aliphatic | 230 uM [U-13C; U-15N] CPSF73, 230 uM [U-13C; U-15N] CPSF100, 20 mM TRIS, 150 mM sodium chloride, 2 mM DTT | 90% H2O/10% D2O | 150 mM | 7.5 | 1 atm | 298 | Bruker AVANCE NEO 800 |
5 | 3D 1H-15N NOESY | 880 uM [U-13C; U-15N] CPSF73, 880 uM [U-13C; U-15N] CPSF100, 20 mM TRIS, 150 mM sodium chloride, 2 mM DTT | 90% H2O/10% D2O | 150 mM | 7.5 | 1 atm | 298 | Bruker AVANCE NEO 800 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE NEO | 800 |
2 | Bruker | AVANCE NEO | 700 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | CNS | |
simulated annealing | ARIA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 250 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | CNS | 1.2 | Brunger, Adams, Clore, Gros, Nilges and Read |
2 | structure calculation | ARIA | 2.3 | Linge, O'Donoghue and Nilges |
3 | chemical shift assignment | Sparky | Goddard | |
4 | peak picking | Sparky | Goddard | |
5 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
6 | collection | TopSpin | 4.0 | Bruker Biospin |