8AIS

Crystal structure of cutinase PsCut from Pseudomonas saudimassiliensis

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP		293	0.1 M sodium acetate pH 4.6, 8% PEG 4000

Crystal Properties
Matthews coefficient	Solvent content
2.02	39.02

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 158.786	α = 90
b = 56.813	β = 121.627
c = 105.796	γ = 90

Symmetry
Space Group	C 1 2 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS 6M-F		2017-12-04	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	DIAMOND BEAMLINE I04-1	0.91587	Diamond	I04-1

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Rpim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.56	52.38	98.9	0.092	0.04	0.998	9	4.7		113320

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Rpim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.56	1.59	93.7		0.507	0.449	0.473	1.1	1.9

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	4CG1	1.56	52.377	112473	5514	98.292	0.179	0.1779	0.203	21.566

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.408		0.103	0.568		-0.163

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_6_deg	16.886
r_dihedral_angle_3_deg	12.615
r_dihedral_angle_2_deg	12.458
r_dihedral_angle_1_deg	6.824
r_lrange_it	5.948
r_lrange_other	5.845
r_scangle_it	2.573
r_scangle_other	2.573
r_mcangle_it	2.017
r_mcangle_other	2.017
r_scbond_it	1.67
r_scbond_other	1.664
r_angle_refined_deg	1.458
r_mcbond_it	1.266
r_mcbond_other	1.263
r_angle_other_deg	0.528
r_symmetry_nbd_refined	0.348
r_nbd_other	0.239
r_symmetry_xyhbond_nbd_other	0.23
r_xyhbond_nbd_refined	0.219
r_nbd_refined	0.214
r_symmetry_xyhbond_nbd_refined	0.203
r_symmetry_nbd_other	0.191
r_nbtor_refined	0.18
r_symmetry_nbtor_other	0.08
r_chiral_restr	0.079
r_ncsr_local_group_1	0.077
r_ncsr_local_group_2	0.07
r_ncsr_local_group_3	0.067
r_bond_refined_d	0.009
r_gen_planes_refined	0.008
r_bond_other_d	0.002
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	6104
Nucleic Acid Atoms
Solvent Atoms	684
Heterogen Atoms	4

Software

Software
Software Name	Purpose
REFMAC	refinement
DIALS	data reduction
DIALS	data scaling
MOLREP	phasing