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Phosphatidylserine-dependent synaptic vesicle membrane sculpting by synaptogyrin
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.8 mM [U-15N] Synaptogyrin 1b 90% H2O/10% D2O 20 mM 8.5 ambient Pa 313 Bruker AVANCE III HD 950 2 2D 1H-13C HSQC aliphatic 0.8 mM [U-100% 13C; U-100% 15N] Synaptogyrin 1b 100% D2O 20 mM 8.5 ambient Pa 313 Bruker AVANCE III HD 950 3 3D HNCO 0.8 mM [U-13C; U-15N; U-2H] Synaptogyrin 1b 90% H2O/10% D2O 20 mM 8.5 ambient Pa 313 Bruker AVANCE III HD 950 4 3D HN(CA)CO 0.8 mM [U-13C; U-15N; U-2H] Synaptogyrin 1b 90% H2O/10% D2O 20 mM 8.5 ambient Pa 313 Bruker AVANCE III HD 950 5 3D HNCA 0.8 mM [U-13C; U-15N; U-2H] Synaptogyrin 1b 90% H2O/10% D2O 20 mM 8.5 ambient Pa 313 Bruker AVANCE III HD 950 6 3D HN(CO)CA 0.8 mM [U-13C; U-15N; U-2H] Synaptogyrin 1b 90% H2O/10% D2O 20 mM 8.5 ambient Pa 313 Bruker AVANCE III HD 950 7 3D HNCACB 0.8 mM [U-13C; U-15N; U-2H] Synaptogyrin 1b 90% H2O/10% D2O 20 mM 8.5 ambient Pa 313 Bruker AVANCE III HD 950 8 3D HNCB 0.8 mM [U-13C; U-15N; U-2H] Synaptogyrin 1b 90% H2O/10% D2O 20 mM 8.5 ambient Pa 313 Bruker AVANCE III HD 950 10 3D 1H-15N NOESY 0.8 mM [U-15N; U-2H] Synaptogyrin 1b 100% D2O 20 mM 8.5 ambient Pa 313 Bruker AVANCE III HD 900 9 3D 1H-13C NOESY 0.8 mM [U-100% 13C; U-100% 15N] Synaptogyrin 1b 100% D2O 20 mM 8.5 ambient Pa 313 Bruker AVANCE III HD 900 11 3D 1H-15N NOESY 0.8 mM [U-15N] Synaptogyrin 1b 100% D2O 20 mM 8.5 ambient Pa 313 Bruker AVANCE III HD 900
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III HD 950 2 Bruker AVANCE III HD 900
NMR Refinement Method Details Software distance geometry CS-ROSETTA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 470 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment CcpNmr Analysis CCPN 2 processing NMRDraw Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 peak picking CYANA Guntert, Mumenthaler and Wuthrich 4 structure calculation CS-ROSETTA Shen, Vernon, Baker and Bax