7ZAF

Sam68

X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP		293	Ammonium sulfate

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 135.34	α = 90
b = 135.34	β = 90
c = 81.659	γ = 120

Symmetry
Space Group	P 61 2 2

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS 6M		2020-06-12	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	ALBA BEAMLINE XALOC	0.9792	ALBA	XALOC

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.71	47.657	100	0.999	16.4	20.9		12475

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.71	2.84			0.545

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	5EMO	2.71	47.657	12449	235	99.944	0.204	0.2026	0.2561	76.455

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.372	-0.186		-0.372		1.207

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	32.131
r_dihedral_angle_4_deg	23.287
r_dihedral_angle_3_deg	20.075
r_lrange_it	17.604
r_scangle_it	15.931
r_scbond_it	11.775
r_mcangle_it	10.293
r_dihedral_angle_1_deg	7.684
r_mcbond_it	7.648
r_angle_refined_deg	2.409

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	32.131
r_dihedral_angle_4_deg	23.287
r_dihedral_angle_3_deg	20.075
r_lrange_it	17.604
r_scangle_it	15.931
r_scbond_it	11.775
r_mcangle_it	10.293
r_dihedral_angle_1_deg	7.684
r_mcbond_it	7.648
r_angle_refined_deg	2.409
r_nbtor_refined	0.338
r_nbd_refined	0.248
r_chiral_restr	0.208
r_symmetry_nbd_refined	0.173
r_xyhbond_nbd_refined	0.159
r_symmetry_xyhbond_nbd_refined	0.141
r_bond_refined_d	0.011
r_gen_planes_refined	0.01

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	929
Nucleic Acid Atoms
Solvent Atoms	15
Heterogen Atoms	51

Software

Software
Software Name	Purpose
REFMAC	refinement
XDS	data reduction
Aimless	data scaling
MOLREP	phasing

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.