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Crystal Structure of human Focal Adhesion Targeting (FAT) domain of the Focal Adhesion Kinase
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1OW6
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8 293 2500 mM Sodium chloride 100 mM Imidazole/ Hydrochloric acid pH 8.0
Crystal Properties Matthews coefficient Solvent content 2.18 43.55
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 39.333 α = 90 b = 94.311 β = 90 c = 85.557 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 9M 2020-11-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 2 0.98011 SOLEIL PROXIMA 2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.09 47.16 99.5 0.165 0.998 9.7 13 9713
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.09 2.15 94.8 4.81 0.528
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 1ow6 2.093 47.155 9693 485 99.538 0.242 0.2395 0.2428 0.2862 0.2816 63.82
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 5.137 -5.653 0.516
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.28 r_dihedral_angle_3_deg 16.922 r_dihedral_angle_4_deg 12.171 r_lrange_it 11.286 r_scangle_it 9.533 r_scbond_it 6.747 r_mcangle_it 6.66 r_dihedral_angle_1_deg 5.969 r_mcbond_it 4.775 r_angle_refined_deg 1.54
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.28 r_dihedral_angle_3_deg 16.922 r_dihedral_angle_4_deg 12.171 r_lrange_it 11.286 r_scangle_it 9.533 r_scbond_it 6.747 r_mcangle_it 6.66 r_dihedral_angle_1_deg 5.969 r_mcbond_it 4.775 r_angle_refined_deg 1.54 r_symmetry_nbd_refined 0.323 r_nbtor_refined 0.301 r_symmetry_xyhbond_nbd_refined 0.245 r_nbd_refined 0.222 r_xyhbond_nbd_refined 0.154 r_chiral_restr 0.115 r_bond_refined_d 0.006 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1126 Nucleic Acid Atoms Solvent Atoms 13 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling MoRDa phasing