7R6P

Solution structure of peptide toxin MIITX2-Mg1a from the venom of the Australian giant red bull ant Myrmecia gulosa


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC350 uM [U-100% 13C; U-100% 15N] MIITX2-Mg1a, 50 mM MES95% H2O/5% D2O50 mM6.51 atm293Bruker AVANCE III 600
23D CBCA(CO)NH350 uM [U-100% 13C; U-100% 15N] MIITX2-Mg1a, 50 mM MES95% H2O/5% D2O50 mM6.51 atm293Bruker AVANCE III 600
33D HNCACB350 uM [U-100% 13C; U-100% 15N] MIITX2-Mg1a, 50 mM MES95% H2O/5% D2O50 mM6.51 atm293Bruker AVANCE III 600
43D HCCH-COSY350 uM [U-100% 13C; U-100% 15N] MIITX2-Mg1a, 50 mM MES95% H2O/5% D2O50 mM6.51 atm293Bruker AVANCE III 600
52D 1H-13C HSQC350 uM [U-100% 13C; U-100% 15N] MIITX2-Mg1a, 50 mM MES95% H2O/5% D2O50 mM6.51 atm293Bruker AVANCE III 600
63D 1H-13C NOESY aliphatic350 uM [U-100% 13C; U-100% 15N] MIITX2-Mg1a, 50 mM MES95% H2O/5% D2O50 mM6.51 atm293Bruker AVANCE III 900
73D 1H-13C NOESY aromatic350 uM [U-100% 13C; U-100% 15N] MIITX2-Mg1a, 50 mM MES95% H2O/5% D2O50 mM6.51 atm293Bruker AVANCE III 900
83D 1H-15N NOESY350 uM [U-100% 13C; U-100% 15N] MIITX2-Mg1a, 50 mM MES95% H2O/5% D2O50 mM6.51 atm293Bruker AVANCE III 900
93D HNCO350 uM [U-100% 13C; U-100% 15N] MIITX2-Mg1a, 50 mM MES95% H2O/5% D2O50 mM6.51 atm293Bruker AVANCE III 600
103D HNCA350 uM [U-100% 13C; U-100% 15N] MIITX2-Mg1a, 50 mM MES95% H2O/5% D2O50 mM6.51 atm293Bruker AVANCE III 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
2BrukerAVANCE III900
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with best stereochemical properties
Conformers Calculated Total Number30
Conformers Submitted Total Number20
Representative Model1 (target function)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingTopSpinv.3.2Bruker Biospin
2refinementCYANAGuntert, Mumenthaler and Wuthrich
3chemical shift assignmentCcpNmr AnalysisCCPN
4peak pickingCcpNmr AnalysisCCPN
5geometry optimizationTALOS-NYang Shen and Ad Bax
6structure calculationCYANAGuntert, Mumenthaler and Wuthrich