7PRN

E1M, D97A, E99A MUTANT OF RH. BLASTICA PORIN


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.8pH 7.8
Crystal Properties
Matthews coefficientSolvent content
4.2766

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 104.4α = 90
b = 104.4β = 90
c = 124.25γ = 120
Symmetry
Space GroupH 3

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray293IMAGE PLATEMARRESEARCH1997-11-26M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RUH3R

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.2532.9599.80.0440.04430.23.523933
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.252.3799.80.1320.13211.43.7

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONDIFFERENCE FOURIERTHROUGHOUTPDB ENTRY 1PRN2.2532.9123933240599.80.2150.222SAME AS WILD-TYPE30.1
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor19.7
p_transverse_tor16.8
p_planar_tor4.3
p_scangle_it4.121
p_scbond_it2.737
p_mcangle_it1.768
p_mcbond_it1.455
p_multtor_nbd0.251
p_singtor_nbd0.193
p_chiral_restr0.172
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor19.7
p_transverse_tor16.8
p_planar_tor4.3
p_scangle_it4.121
p_scbond_it2.737
p_mcangle_it1.768
p_mcbond_it1.455
p_multtor_nbd0.251
p_singtor_nbd0.193
p_chiral_restr0.172
p_hb_or_metal_coord0.163
p_xyhbond_nbd0.163
p_planar_d0.05
p_angle_d0.038
p_plane_restr0.0215
p_bond_d0.02
p_angle_deg
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2156
Nucleic Acid Atoms
Solvent Atoms61
Heterogen Atoms21

Software

Software
Software NamePurpose
CCP4model building
REFMACrefinement
MOSFLMdata reduction
CCP4data scaling
CCP4phasing