7PQ4 | pdb_00007pq4

NMR Structure of RgpB C-terminal Domain

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1 mM [U-13C; U-15N] RgpB-CTD (G662-K736), 20 mM sodium phosphate, 50 mM sodium chloride, 2 mM sodium azide	90% H2O/10% D2O	70 mM	6	1 atm	310	Bruker AVANCE III HD 900
2	3D HNCO	1 mM [U-13C; U-15N] RgpB-CTD (G662-K736), 20 mM sodium phosphate, 50 mM sodium chloride, 2 mM sodium azide	90% H2O/10% D2O	70 mM	6	1 atm	310	Bruker AVANCE III HD 900
3	3D HNCACO	1 mM [U-13C; U-15N] RgpB-CTD (G662-K736), 20 mM sodium phosphate, 50 mM sodium chloride, 2 mM sodium azide	90% H2O/10% D2O	70 mM	6	1 atm	310	Bruker AVANCE III HD 900
4	3D HNCACB	1 mM [U-13C; U-15N] RgpB-CTD (G662-K736), 20 mM sodium phosphate, 50 mM sodium chloride, 2 mM sodium azide	90% H2O/10% D2O	70 mM	6	1 atm	310	Bruker AVANCE III HD 900
5	3D CBCA(CO)NH	1 mM [U-13C; U-15N] RgpB-CTD (G662-K736), 20 mM sodium phosphate, 50 mM sodium chloride, 2 mM sodium azide	90% H2O/10% D2O	70 mM	6	1 atm	310	Bruker AVANCE III HD 900
6	3D H(CCO)NH	1 mM [U-13C; U-15N] RgpB-CTD (G662-K736), 20 mM sodium phosphate, 50 mM sodium chloride, 2 mM sodium azide	90% H2O/10% D2O	70 mM	6	1 atm	310	Bruker AVANCE III HD 900
7	3D C(CO)NH	1 mM [U-13C; U-15N] RgpB-CTD (G662-K736), 20 mM sodium phosphate, 50 mM sodium chloride, 2 mM sodium azide	90% H2O/10% D2O	70 mM	6	1 atm	310	Bruker AVANCE III HD 900
8	3D HCCH-TOCSY	1 mM [U-13C; U-15N] RgpB-CTD (G662-K736), 20 mM sodium phosphate, 50 mM sodium chloride, 2 mM sodium azide	90% H2O/10% D2O	70 mM	6	1 atm	310	Bruker AVANCE III HD 900
9	3D CCH-TOCSY	1 mM [U-13C; U-15N] RgpB-CTD (G662-K736), 20 mM sodium phosphate, 50 mM sodium chloride, 2 mM sodium azide	90% H2O/10% D2O	70 mM	6	1 atm	310	Bruker AVANCE III HD 900
10	HBCBCGCDHD	1 mM [U-13C; U-15N] RgpB-CTD (G662-K736), 20 mM sodium phosphate, 50 mM sodium chloride, 2 mM sodium azide	90% H2O/10% D2O	70 mM	6	1 atm	310	Bruker AVANCE III HD 900
11	HBCBCGCDCEHE	1 mM [U-13C; U-15N] RgpB-CTD (G662-K736), 20 mM sodium phosphate, 50 mM sodium chloride, 2 mM sodium azide	90% H2O/10% D2O	70 mM	6	1 atm	310	Bruker AVANCE III HD 900
12	3D 1H-13C NOESY	1 mM [U-13C; U-15N] RgpB-CTD (G662-K736), 20 mM sodium phosphate, 50 mM sodium chloride, 2 mM sodium azide	90% H2O/10% D2O	70 mM	6	1 atm	310	Bruker AVANCE III HD 900
13	3D 1H-15N NOESY	1 mM [U-13C; U-15N] RgpB-CTD (G662-K736), 20 mM sodium phosphate, 50 mM sodium chloride, 2 mM sodium azide	90% H2O/10% D2O	70 mM	6	1 atm	310	Bruker AVANCE III HD 900

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III HD	900

NMR Refinement
Method	Details	Software
molecular dynamics		CNS

NMR Ensemble Information
Conformer Selection Criteria	all calculated structures submitted
Conformers Calculated Total Number	20
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	CNS	1.3	Brunger, Adams, Clore, Gros, Nilges and Read
2	structure calculation	ARIA	2.3	Linge, O'Donoghue and Nilges
3	chemical shift assignment	CcpNmr Analysis		CCPN
4	peak picking	CcpNmr Analysis		CCPN
5	geometry optimization	DANGLE	1.1.1	Cheung, Maguire, Stevens and Broadhurst
6	data analysis	WHAT IF		Vriend
7	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
8	processing	NMRDraw		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax