7PMP | pdb_00007pmp

Solution structure of Legionella pneumophila LspD

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.4 mM [U-99% 13C; U-99% 15N] LspD N0, 50 mM sodium phosphate, 50 mM sodium chloride	90% H2O/10% D2O	50 mM NaCl, 50 mM sodium phosphate	7.0	1 atm	310	Bruker AVANCE III 700
2	3D CBCA(CO)NH	0.4 mM [U-99% 13C; U-99% 15N] LspD N0, 50 mM sodium phosphate, 50 mM sodium chloride	90% H2O/10% D2O	50 mM NaCl, 50 mM sodium phosphate	7.0	1 atm	310	Bruker AVANCE III 700
3	3D HNCO	0.4 mM [U-99% 13C; U-99% 15N] LspD N0, 50 mM sodium phosphate, 50 mM sodium chloride	90% H2O/10% D2O	50 mM NaCl, 50 mM sodium phosphate	7.0	1 atm	310	Bruker AVANCE III 700
4	3D HCCH-TOCSY	0.4 mM [U-99% 13C; U-99% 15N] LspD N0, 50 mM sodium phosphate, 50 mM sodium chloride	90% H2O/10% D2O	50 mM NaCl, 50 mM sodium phosphate	7.0	1 atm	310	Bruker AVANCE III 700
5	3D CCH-TOCSY	0.4 mM [U-99% 13C; U-99% 15N] LspD N0, 50 mM sodium phosphate, 50 mM sodium chloride	90% H2O/10% D2O	50 mM NaCl, 50 mM sodium phosphate	7.0	1 atm	310	Bruker AVANCE III 700
6	3D HNCA	0.4 mM [U-99% 13C; U-99% 15N] LspD N0, 50 mM sodium phosphate, 50 mM sodium chloride	90% H2O/10% D2O	50 mM NaCl, 50 mM sodium phosphate	7.0	1 atm	310	Bruker AVANCE III 700
10	3D HN(CO)CA	0.4 mM [U-99% 13C; U-99% 15N] LspD N0, 50 mM sodium phosphate, 50 mM sodium chloride	90% H2O/10% D2O	50 mM NaCl, 50 mM sodium phosphate	7.0	1 atm	310	Bruker AVANCE III 700
9	3D HNCACB	0.4 mM [U-99% 13C; U-99% 15N] LspD N0, 50 mM sodium phosphate, 50 mM sodium chloride	90% H2O/10% D2O	50 mM NaCl, 50 mM sodium phosphate	7.0	1 atm	310	Bruker AVANCE III 700
8	3D 1H-13C NOESY	0.4 mM [U-99% 13C; U-99% 15N] LspD N0, 50 mM sodium phosphate, 50 mM sodium chloride	90% H2O/10% D2O	50 mM NaCl, 50 mM sodium phosphate	7.0	1 atm	310	Bruker AVANCE III 700
7	3D 1H-15N NOESY	0.4 mM [U-99% 13C; U-99% 15N] LspD N0, 50 mM sodium phosphate, 50 mM sodium chloride	90% H2O/10% D2O	50 mM NaCl, 50 mM sodium phosphate	7.0	1 atm	310	Bruker AVANCE III 700
11	2D 1H-13C HSQC	0.4 mM [U-99% 13C; U-99% 15N] LspD N0, 50 mM sodium phosphate, 50 mM sodium chloride	90% H2O/10% D2O	50 mM NaCl, 50 mM sodium phosphate	7.0	1 atm	310	Bruker AVANCE III 700

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	700

NMR Refinement
Method	Details	Software
molecular dynamics		ARIA

NMR Ensemble Information
Conformer Selection Criteria	all calculated structures submitted
Conformers Calculated Total Number	20
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
2	structure calculation	ARIA		Linge, O'Donoghue and Nilges
3	chemical shift assignment	CcpNmr Analysis		CCPN
4	peak picking	CcpNmr Analysis		CCPN