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NMR solution structure of the C6 domain of von Willebrand Factor
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 300 uM [U-13C; U-15N] von Willebrand Factor C6 domain, 20 mM None sodium phosphate 90% H2O/10% D2O 20 mM 6.5 1.013 bar 298 Bruker AVANCE III 600 2 3D HNCACB 300 uM [U-13C; U-15N] von Willebrand Factor C6 domain, 20 mM None sodium phosphate 90% H2O/10% D2O 20 mM 6.5 1.013 bar 298 Bruker AVANCE III 600 3 3D HNCA 300 uM [U-13C; U-15N] von Willebrand Factor C6 domain, 20 mM None sodium phosphate 90% H2O/10% D2O 20 mM 6.5 1.013 bar 298 Bruker AVANCE III 600 4 3D CBCA(CO)NH 300 uM [U-13C; U-15N] von Willebrand Factor C6 domain, 20 mM None sodium phosphate 90% H2O/10% D2O 20 mM 6.5 1.013 bar 298 Bruker AVANCE III 600 5 3D HNCO 300 uM [U-13C; U-15N] von Willebrand Factor C6 domain, 20 mM None sodium phosphate 90% H2O/10% D2O 20 mM 6.5 1.013 bar 298 Bruker AVANCE III 600 6 2D 1H-13C HSQC 300 uM [U-13C; U-15N] von Willebrand Factor C6 domain, 20 mM None sodium phosphate 90% H2O/10% D2O 20 mM 6.5 1.013 bar 298 Bruker AVANCE III 600 7 3D HBHA(CO)NH 300 uM [U-13C; U-15N] von Willebrand Factor C6 domain, 20 mM None sodium phosphate 90% H2O/10% D2O 20 mM 6.5 1.013 bar 298 Bruker AVANCE III 600 8 3D HCCH-TOCSY 300 uM [U-13C; U-15N] von Willebrand Factor C6 domain, 20 mM None sodium phosphate 90% H2O/10% D2O 20 mM 6.5 1.013 bar 298 Bruker AVANCE III 600 9 3D H(CCO)NH 300 uM [U-13C; U-15N] von Willebrand Factor C6 domain, 20 mM None sodium phosphate 90% H2O/10% D2O 20 mM 6.5 1.013 bar 298 Bruker AVANCE III 600 10 3D C(CO)NH 300 uM [U-13C; U-15N] von Willebrand Factor C6 domain, 20 mM None sodium phosphate 90% H2O/10% D2O 20 mM 6.5 1.013 bar 298 Bruker AVANCE III 600 11 3D 1H-13C NOESY 300 uM [U-13C; U-15N] von Willebrand Factor C6 domain, 20 mM None sodium phosphate 90% H2O/10% D2O 20 mM 6.5 1.013 bar 298 Bruker AVANCE III 600 12 3D 1H-15N NOESY 300 uM [U-13C; U-15N] von Willebrand Factor C6 domain, 20 mM None sodium phosphate 90% H2O/10% D2O 20 mM 6.5 1.013 bar 298 Bruker AVANCE III 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600
NMR Refinement Method Details Software simulated annealing ARIA torsion angle dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria all calculated structures submitted Conformers Calculated Total Number 20 Conformers Submitted Total Number 20 Representative Model 1 (target function)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment CARA Keller and Wuthrich 5 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 6 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 2 structure calculation ARIA Linge, O'Donoghue and Nilges