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periplasmic domain of Vibrio cholerae ToxR
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 400 uM [U-13C; U-15N] ToxRp 90% H2O/10% D2O 50 mM 6.5 1 bar 298 Bruker AVANCE III 700 2 2D 1H-13C HSQC 400 uM [U-13C; U-15N] ToxRp 90% H2O/10% D2O 50 mM 6.5 1 bar 298 Bruker AVANCE III 700 3 3D HCCH-TOCSY 400 uM [U-13C; U-15N] ToxRp 90% H2O/10% D2O 50 mM 6.5 1 bar 298 Bruker AVANCE III 700 4 3D HNCA 400 uM [U-13C; U-15N] ToxRp 90% H2O/10% D2O 50 mM 6.5 1 bar 298 Bruker AVANCE III 700 5 3D HNCACB 400 uM [U-13C; U-15N] ToxRp 90% H2O/10% D2O 50 mM 6.5 1 bar 298 Bruker AVANCE III 700 12 3D HNCO 400 uM [U-13C; U-15N] ToxRp 90% H2O/10% D2O 50 mM 6.5 1 bar 298 Bruker AVANCE III 700 11 3D HNCACO 400 uM [U-13C; U-15N] ToxRp 90% H2O/10% D2O 50 mM 6.5 1 bar 298 Bruker AVANCE III 700 10 3D HN(CO)CA 400 uM [U-13C; U-15N] ToxRp 90% H2O/10% D2O 50 mM 6.5 1 bar 298 Bruker AVANCE III 700 9 3D H(CCO)NH 400 uM [U-13C; U-15N] ToxRp 90% H2O/10% D2O 50 mM 6.5 1 bar 298 Bruker AVANCE III 700 8 3D H(CCO)NH 400 uM [U-13C; U-15N] ToxRp 90% H2O/10% D2O 50 mM 6.5 1 bar 298 Bruker AVANCE III 700 7 3D 1H-13C NOESY 400 uM [U-13C; U-15N] ToxRp 90% H2O/10% D2O 50 mM 6.5 1 bar 298 Bruker AVANCE III 700 6 3D 1H-13C NOESY aromatic 400 uM [U-13C; U-15N] ToxRp 90% H2O/10% D2O 50 mM 6.5 1 bar 298 Bruker AVANCE III 700 13 3D 1H-15N NOESY 400 uM [U-13C; U-15N] ToxRp 90% H2O/10% D2O 50 mM 6.5 1 bar 298 Bruker AVANCE III 700
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 700
NMR Refinement Method Details Software simulated annealing CYANA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CYANA Guntert P. 2 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 5 processing NMRDraw Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 chemical shift assignment CcpNmr Analysis CCPN 6 chemical shift calculation CYANA Guntert, Mumenthaler and Wuthrich