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Norovirus T=3 GII.4 HOV VLP
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 3.9935 f_angle_d 0.5344 f_chiral_restr 0.0435 f_plane_restr 0.0044 f_bond_d 0.0024
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 51913 Reported Resolution (Å) 3.8 Resolution Method FSC 0.143 CUT-OFF Other Details Using Cryosparc GSFSC, resolution calculated: No Mask = 4.2 A, Spherical = 4 A, Loose = 3.9 A, Tight = 3.8 A, corrected = 3.8 A Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 55.96
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model JEOL 3200FSC Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version INITIAL EULER ASSIGNMENT cryoSPARC 2.15.0 FINAL EULER ASSIGNMENT cryoSPARC 2.15.0 RECONSTRUCTION cryoSPARC 2.15.0
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION