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Interaction between a fluoroquinolone derivative and RNAs with a single bulge
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 0.18 mM RNA (5'-R(*GP*GP*AP*UP*GP*CP*UP*UP*AP*CP*UP*CP*AP*GP*CP*GP*AP*UP*CP*C)-3') 95% H2O/5% D2O 50 mM 6.5 1 atm 288 Bruker AVANCE 600 2 2D HOHAHA 0.18 mM RNA (5'-R(*GP*GP*AP*UP*GP*CP*UP*UP*AP*CP*UP*CP*AP*GP*CP*GP*AP*UP*CP*C)-3') 95% H2O/5% D2O 50 mM 6.5 1 atm 288 Bruker AVANCE 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software na CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 11 Representative Model 1 (minimized average structure)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS 1.3 Brunger, Adams, Clore, Gros, Nilges and Read 2 structure calculation CNS 1.3 Brunger, Adams, Clore, Gros, Nilges and Read 3 chemical shift assignment Sparky 3.114 Goddard 4 peak picking Sparky 3.114 Goddard