7FHQ

Solution structure of the pathogenic mutant G131V of Human prion protein (91-231)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
22D 1H-13C HSQC10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 13C; U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
112D (HB)CB(CGCD)HD10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 13C; U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
122D (HB)CB(CGCDCE)HE10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 13C; U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
33D HNCACB10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 13C; U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
43D CBCA(CO)NH10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 13C; U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
53D HNCA10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 13C; U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
63D HN(CO)CA10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 13C; U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
73D HNCO10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 13C; U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
83D HN(CA)CO10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 13C; U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
153D HBHA(CO)NH10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 13C; U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
163D H(CCO)NH10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 13C; U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
93D HCCH-TOCSY10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 13C; U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
143D C(CO)NH10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 13C; U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
133D 1H-15N TOCSY10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 13C; U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
103D HCCH-TOCSY10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 13C; U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
183D 1H-15N NOESY10 % v/v [U-100% 2H] D2O, 90 % v/v H2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 15N] HuPrP G131V90% H2O/10% D2O20 mM4.51 atm298Bruker AVANCE III 850
173D 1H-13C NOESY100 % v/v [U-100% 2H] D2O, 20 mM sodium acetate, 0.02 % w/v sodium azide, 0.65 mM [U-99% 13C; U-99% 15N] HuPrP G131V100% D2O20 mM4.51 atm298Bruker AVANCE III 850
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III850
NMR Refinement
MethodDetailsSoftware
simulated annealingCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2chemical shift assignmentNMRFAM-SPARKY1.4.7Lee W., Tonelli M., Markley J. L.
3structure calculationCNSAria2.3Brunger, Adams, Clore, Gros, Nilges and Read
4refinementCNSAria2.3Brunger, Adams, Clore, Gros, Nilges and Read