7F7N

Solution structure of apo-WhiB4 from Mycobacterium tuberculosis


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-13C HSQC0.4 mM [U-100% 13C; U-100% 15N] WhiB495% H2O/5% D2O50 mM NaCl mM71 atm298Bruker AVANCE III HD 950
22D 1H-15N HSQC0.4 mM [U-100% 13C; U-100% 15N] WhiB495% H2O/5% D2O50 mM NaCl mM71 atm298Bruker AVANCE III HD 950
33D HNCACB0.4 mM [U-100% 13C; U-100% 15N] WhiB495% H2O/5% D2O50 mM NaCl mM71 atm298Bruker AVANCE III HD 700
43D CBCA(CO)NH0.4 mM [U-100% 13C; U-100% 15N] WhiB495% H2O/5% D2O50 mM NaCl mM71 atm298Bruker AVANCE III HD 700
53D CCHCOSY0.4 mM [U-100% 13C; U-100% 15N] WhiB495% H2O/5% D2O50 mM NaCl mM71 atm298Bruker AVANCE III HD 700
73D 1H-15N NOESY0.4 mM [U-100% 13C; U-100% 15N] WhiB495% H2O/5% D2O50 mM NaCl mM71 atm298Bruker AVANCE III HD 950
63D 1H-13C NOESY0.4 mM [U-100% 13C; U-100% 15N] WhiB495% H2O/5% D2O50 mM NaCl mM71 atm298Bruker AVANCE III HD 950
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III HD700
2BrukerAVANCE III HD950
NMR Refinement
MethodDetailsSoftware
molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementSANEDuggan, Legge, Dyson & Wright
2structure calculationAmberCase, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
3chemical shift assignmentNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4peak pickingNMRViewJohnson, One Moon Scientific