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Solution structure of ATG8f of Arabidopsis thaliana
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.3 mM [U-15N] ATG8f 90% H2O/10% D2O 1X PBS 7.4 1 atm 298 Bruker AVANCE 700 2 3D 1H-15N NOESY 0.3 mM [U-15N] ATG8f 90% H2O/10% D2O 1X PBS 7.4 1 atm 298 Bruker AVANCE 700 3 3D 1H-13C NOESY aliphatic 0.3 mM [U-13C; U-15N] ATG8f 90% H2O/10% D2O 1X PBS 7.4 1 atm 298 Bruker AVANCE 700 4 3D 1H-13C NOESY aromatic 0.3 mM [U-13C; U-15N] ATG8f 90% H2O/10% D2O 1X PBS 7.4 1 atm 298 Bruker AVANCE 700 5 4D HSQC-NOESY-HSQC 0.3 mM [U-13C; U-15N] ATG8f 90% H2O/10% D2O 1X PBS 7.4 1 atm 298 Bruker AVANCE 700 6 3D HNCACB 0.3 mM [U-13C; U-15N] ATG8f 90% H2O/10% D2O 1X PBS 7.4 1 atm 298 Bruker AVANCE 700 9 3D CBCA(CO)NH 0.3 mM [U-13C; U-15N] ATG8f 90% H2O/10% D2O 1X PBS 7.4 1 atm 298 Bruker AVANCE 700 7 3D HNCA 0.3 mM [U-13C; U-15N] ATG8f 90% H2O/10% D2O 1X PBS 7.4 1 atm 298 Bruker AVANCE 700 8 3D HN(CO)CA 0.3 mM [U-13C; U-15N] ATG8f 90% H2O/10% D2O 1X PBS 7.4 1 atm 298 Bruker AVANCE 700 10 3D HNCO 0.3 mM [U-13C; U-15N] ATG8f 90% H2O/10% D2O 1X PBS 7.4 1 atm 298 Bruker AVANCE 700 11 3D HN(CA)CO 0.3 mM [U-13C; U-15N] ATG8f 90% H2O/10% D2O 1X PBS 7.4 1 atm 298 Bruker AVANCE 700
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 700
NMR Refinement Method Details Software DGSA-distance geometry simulated annealing CNS
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 9999 Conformers Submitted Total Number 10 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 peak picking NMRView Johnson, One Moon Scientific 2 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 collection TopSpin Bruker Biospin 4 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read 5 structure calculation ARIA Linge, O'Donoghue and Nilges