7BWI

Solution structure of recombinant APETx1

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.691 mM [U-100% 13C; U-100% 15N] APETx1, 20 mM potassium phosphate, 100 mM sodium chloride	90% H2O/10% D2O	120 mM	6.0	1 atm	298	Bruker AVANCE III HD 700
2	2D 1H-13C HSQC aliphatic	0.691 mM [U-100% 13C; U-100% 15N] APETx1, 20 mM potassium phosphate, 100 mM sodium chloride	90% H2O/10% D2O	120 mM	6.0	1 atm	298	Bruker AVANCE III HD 700
3	2D 1H-13C HSQC aromatic	0.691 mM [U-100% 13C; U-100% 15N] APETx1, 20 mM potassium phosphate, 100 mM sodium chloride	90% H2O/10% D2O	120 mM	6.0	1 atm	298	Bruker AVANCE III HD 700
4	3D HNCACB	0.691 mM [U-100% 13C; U-100% 15N] APETx1, 20 mM potassium phosphate, 100 mM sodium chloride	90% H2O/10% D2O	120 mM	6.0	1 atm	298	Bruker Avance 600 600
5	3D CBCA(CO)NH	0.691 mM [U-100% 13C; U-100% 15N] APETx1, 20 mM potassium phosphate, 100 mM sodium chloride	90% H2O/10% D2O	120 mM	6.0	1 atm	298	Bruker Avance 600 600
6	3D HNCO	0.691 mM [U-100% 13C; U-100% 15N] APETx1, 20 mM potassium phosphate, 100 mM sodium chloride	90% H2O/10% D2O	120 mM	6.0	1 atm	298	Bruker Avance 600 600
8	3D HCCH-TOCSY	0.691 mM [U-100% 13C; U-100% 15N] APETx1, 20 mM potassium phosphate, 100 mM sodium chloride	90% H2O/10% D2O	120 mM	6.0	1 atm	298	Bruker Avance 600 600
7	3D HCCH-COSY	0.691 mM [U-100% 13C; U-100% 15N] APETx1, 20 mM potassium phosphate, 100 mM sodium chloride	90% H2O/10% D2O	120 mM	6.0	1 atm	298	Bruker Avance 600 600
12	3D 1H-15N TOCSY	0.691 mM [U-100% 13C; U-100% 15N] APETx1, 20 mM potassium phosphate, 100 mM sodium chloride	90% H2O/10% D2O	120 mM	6.0	1 atm	298	Bruker Avance 600 600
15	3D 1H-15N NOESY	0.691 mM [U-100% 13C; U-100% 15N] APETx1, 20 mM potassium phosphate, 100 mM sodium chloride	90% H2O/10% D2O	120 mM	6.0	1 atm	298	Bruker Avance 600 600
14	3D 1H-13C NOESY aliphatic	0.691 mM [U-100% 13C; U-100% 15N] APETx1, 20 mM potassium phosphate, 100 mM sodium chloride	90% H2O/10% D2O	120 mM	6.0	1 atm	298	Bruker Avance 600 600
13	3D 1H-13C NOESY aromatic	0.691 mM [U-100% 13C; U-100% 15N] APETx1, 20 mM potassium phosphate, 100 mM sodium chloride	90% H2O/10% D2O	120 mM	6.0	1 atm	298	Bruker Avance 600 600
9	3D 1H-15N NOESY	0.691 mM [U-100% 13C; U-100% 15N] APETx1, 20 mM potassium phosphate, 100 mM sodium chloride	90% H2O/10% D2O	120 mM	6.0	1 atm	298	Bruker AVANCE III HD 700
10	3D 1H-13C NOESY aliphatic	0.691 mM [U-100% 13C; U-100% 15N] APETx1, 20 mM potassium phosphate, 100 mM sodium chloride	90% H2O/10% D2O	120 mM	6.0	1 atm	298	Bruker AVANCE III HD 700
11	3D 1H-13C NOESY aromatic	0.691 mM [U-100% 13C; U-100% 15N] APETx1, 20 mM potassium phosphate, 100 mM sodium chloride	90% H2O/10% D2O	120 mM	6.0	1 atm	298	Bruker AVANCE III HD 700

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III HD	700
2	Bruker	Avance 600	600

NMR Refinement
Method	Details	Software
molecular dynamics		Amber

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	200
Conformers Submitted Total Number	20
Representative Model	1 (target function)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	TopSpin	3.5	Bruker Biospin
2	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	chemical shift assignment	Sparky		Goddard
4	peak picking	MAGRO	2.01.28	Kobayashi, N.
5	data analysis	NMRView		Johnson, One Moon Scientific
6	structure calculation	CYANA	3.98	Guntert, Mumenthaler and Wuthrich
7	refinement	Amber	12	Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
8	data analysis	MAGRO	2.01.28	Kobayashi, N.