7ATL

EstCE1, a hydrolase with promiscuous acyltransferase activity


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.52932 ul (17 mg/ml protein, 50 mM Na-phophate, pH 7.5) + 2 ul (10% PEG8000, 200 mM Mg(OAc)2), cryo buffer: 10% PEG8000, 12% PEG400, 200 mM Mg(OAc)2
Crystal Properties
Matthews coefficientSolvent content
3.7868

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 99.433α = 90
b = 99.433β = 90
c = 228.132γ = 120
Symmetry
Space GroupP 61 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 2M2020-03-20MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONBESSY BEAMLINE 14.20.9184BESSY14.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.4785099.10.4060.9787.110.54445436
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.4782.63992.0920.4421.110.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTFREE R-VALUE1ci82.47848.62424306120998.9780.2040.20380.235532.464
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.1450.0730.145-0.471
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.977
r_dihedral_angle_4_deg19.713
r_dihedral_angle_3_deg15.784
r_dihedral_angle_1_deg7.149
r_lrange_other6.662
r_lrange_it6.611
r_scangle_it5.033
r_scangle_other5.032
r_mcangle_it3.849
r_mcangle_other3.849
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.977
r_dihedral_angle_4_deg19.713
r_dihedral_angle_3_deg15.784
r_dihedral_angle_1_deg7.149
r_lrange_other6.662
r_lrange_it6.611
r_scangle_it5.033
r_scangle_other5.032
r_mcangle_it3.849
r_mcangle_other3.849
r_scbond_it3.208
r_scbond_other3.207
r_mcbond_it2.455
r_mcbond_other2.455
r_angle_other_deg2.329
r_angle_refined_deg1.567
r_symmetry_nbd_other0.214
r_symmetry_nbd_refined0.203
r_nbd_refined0.202
r_nbd_other0.188
r_nbtor_refined0.164
r_xyhbond_nbd_refined0.141
r_symmetry_xyhbond_nbd_refined0.138
r_symmetry_nbtor_other0.07
r_chiral_restr0.067
r_bond_other_d0.035
r_bond_refined_d0.009
r_gen_planes_other0.009
r_gen_planes_refined0.007
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2911
Nucleic Acid Atoms
Solvent Atoms173
Heterogen Atoms60

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XSCALEdata scaling
PHASERphasing