6VUM

Structure of nevanimibe-bound human tetrameric ACAT1


ELECTRON MICROSCOPY

Refinement

RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.162
r_dihedral_angle_3_deg15.044
r_dihedral_angle_4_deg11.599
r_dihedral_angle_1_deg5.85
r_long_range_B_refined5.021
r_long_range_B_other5.021
r_mcangle_it1.811
r_mcangle_other1.811
r_angle_refined_deg1.187
r_scangle_other1.08
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.162
r_dihedral_angle_3_deg15.044
r_dihedral_angle_4_deg11.599
r_dihedral_angle_1_deg5.85
r_long_range_B_refined5.021
r_long_range_B_other5.021
r_mcangle_it1.811
r_mcangle_other1.811
r_angle_refined_deg1.187
r_scangle_other1.08
r_angle_other_deg0.982
r_mcbond_it0.963
r_mcbond_other0.963
r_scbond_it0.544
r_scbond_other0.544
r_chiral_restr0.066
r_bond_refined_d0.008
r_gen_planes_refined0.004
r_bond_other_d0.002
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Sample
ACAT1
Specimen Preparation
Sample Aggregation StateCELL
Vitrification Instrument
Cryogen NameETHANE
Sample Vitrification Details
3D Reconstruction
Reconstruction MethodSINGLE PARTICLE
Number of Particles263839
Reported Resolution (Å)3.67
Resolution MethodFSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry TypePOINT
Map-Model Fitting and Refinement
Id1
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details
Data Acquisition
Detector TypeGATAN K3 (6k x 4k)
Electron Dose (electrons/Å**2)60
Imaging Experiment1
Date of Experiment
Temperature (Kelvin)
Microscope ModelFEI TITAN KRIOS
Minimum Defocus (nm)
Maximum Defocus (nm)
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS
Imaging ModeBRIGHT FIELD
Specimen Holder Model
Nominal Magnification
Calibrated Magnification
SourceFIELD EMISSION GUN
Acceleration Voltage (kV)300
Imaging Details
Image Processing
CTF Correction TypeCTF Correction DetailsNumber of Particles SelectedParticle Selection Details
NONE