☰ Navigation Tabs
The structure of the FERM domain and helical linker of human moesin bound to a CD44 peptide
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1E5W
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7 277 0.2M potassium thiocyanate, 0.1M bis-tris pH 7.0, 10% ethylene glycol, 20% PEG3350
Crystal Properties Matthews coefficient Solvent content 2.76 55.42
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 119.967 α = 90 b = 119.967 β = 90 c = 64.596 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER2 XE 16M 2019-11-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I04 0.9795 Diamond I04
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 84.83 99.7 0.166 0.173 0.048 0.999 11.1 23.7 23382
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.27 96.4 3.189 3.492 1.372 0.46 0.6 11.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 1E5W 2.2 84.83 23293 1034 99.318 0.234 0.2322 0.235 0.2758 0.2803 61.379
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.521 -2.521 5.042
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.066 r_dihedral_angle_4_deg 20.109 r_dihedral_angle_3_deg 17.473 r_lrange_it 9.832 r_lrange_other 9.83 r_scangle_it 7.816 r_scangle_other 7.816 r_dihedral_angle_1_deg 6.96 r_mcangle_it 6.66 r_mcangle_other 6.658
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.066 r_dihedral_angle_4_deg 20.109 r_dihedral_angle_3_deg 17.473 r_lrange_it 9.832 r_lrange_other 9.83 r_scangle_it 7.816 r_scangle_other 7.816 r_dihedral_angle_1_deg 6.96 r_mcangle_it 6.66 r_mcangle_other 6.658 r_scbond_it 5.104 r_scbond_other 5.103 r_mcbond_other 4.77 r_mcbond_it 4.769 r_angle_refined_deg 1.47 r_angle_other_deg 1.217 r_symmetry_nbd_refined 0.24 r_nbd_refined 0.21 r_nbd_other 0.186 r_symmetry_nbd_other 0.177 r_nbtor_refined 0.166 r_xyhbond_nbd_refined 0.162 r_symmetry_xyhbond_nbd_refined 0.162 r_symmetry_nbtor_other 0.076 r_chiral_restr 0.057 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2905 Nucleic Acid Atoms Solvent Atoms 39 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement DIALS data reduction Aimless data scaling PHASER phasing