6TR2

Pre-folded structures govern folding pathways of human telomeric G-quadruplexes


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-13C HSQC1 mM 8% 13C, 8% 15N GCN90% H2O/10% D2O0 mM51 atm278Agilent Agilent Agilent Technologies DD2 600 MHz NMR spectrometer 600
22D 1H-15N HSQC1 mM 8% 13C, 8% 15N GCN90% H2O/10% D2O0 mM51 atm278Agilent Agilent Agilent Technologies DD2 600 MHz NMR spectrometer 600
31D 1H-15N HSQC1 mM 8% 13C, 8% 15N GCN90% H2O/10% D2O0 mM51 atm278Agilent Agilent Agilent Technologies DD2 600 MHz NMR spectrometer 600
42D NOESY1 mM GCN90% H2O/10% D2O0 mM51 atm278Agilent Agilent Agilent Technologies DD2 600 MHz NMR spectrometer 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1AgilentAgilent Agilent Technologies DD2 600 MHz NMR spectrometer600
NMR Refinement
MethodDetailsSoftware
simulated annealingAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingVNMRVarian
3chemical shift assignmentSparkyGoddard
4peak pickingSparkyGoddard
2structure calculationAmberCase, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman