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The dissociation mechanism of processive cellulases
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 6CEL
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 293 10 mM sodium acetate, pH 5.0, 20% PEG 5000 monomethyl ether, 0.1 M MES pH 6.0, 10 mM cobalt chloride, 12.5% glycerol.
Crystal Properties Matthews coefficient Solvent content 2.03 39.53
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.363 α = 90 b = 51.632 β = 96.31 c = 65.59 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm 2003-09-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MAX II BEAMLINE I711 0.96700 MAX II I711
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.64 40.48 97.5 8.9 1.6 44198
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.64 1.68 91.1 1.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 6CEL 1.64 29.52 39479 2127 91.1 0.1288 0.1269 0.1407 0.1648 0.1757 RANDOM 7.707
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.09 -0.02 0.26 -0.17
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.187 r_dihedral_angle_4_deg 17.462 r_dihedral_angle_1_deg 13.079 r_dihedral_angle_3_deg 11.986 r_angle_other_deg 2.531 r_angle_refined_deg 1.732 r_mcangle_it 1.539 r_mcbond_it 0.947 r_mcbond_other 0.944 r_chiral_restr 0.088
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.187 r_dihedral_angle_4_deg 17.462 r_dihedral_angle_1_deg 13.079 r_dihedral_angle_3_deg 11.986 r_angle_other_deg 2.531 r_angle_refined_deg 1.732 r_mcangle_it 1.539 r_mcbond_it 0.947 r_mcbond_other 0.944 r_chiral_restr 0.088 r_bond_other_d 0.038 r_gen_planes_other 0.017 r_bond_refined_d 0.013 r_gen_planes_refined 0.011
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3202 Nucleic Acid Atoms Solvent Atoms 680 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction DENZO data reduction SCALEPACK data scaling AMoRE phasing