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Solution structure of the free FOXO1 DNA binding domain
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D HNCACB 380 uM [U-13C; U-15N] FOXO1 DBD, 20 mM sodium phosphate, 50 mM potassium chloride, 2 mM TCEP, 100 % n/a n/a 90% H2O/10% D2O 70 mM 6.5 1 bar 298 Bruker AVANCE III 600 2 3D CBCA(CO)NH 380 uM [U-13C; U-15N] FOXO1 DBD, 20 mM sodium phosphate, 50 mM potassium chloride, 2 mM TCEP, 100 % n/a n/a 90% H2O/10% D2O 70 mM 6.5 1 bar 298 Bruker AVANCE III 600 3 3D HNCO 380 uM [U-13C; U-15N] FOXO1 DBD, 20 mM sodium phosphate, 50 mM potassium chloride, 2 mM TCEP, 100 % n/a n/a 90% H2O/10% D2O 70 mM 6.5 1 bar 298 Bruker AVANCE III 600 4 3D HNCACO 380 uM [U-13C; U-15N] FOXO1 DBD, 20 mM sodium phosphate, 50 mM potassium chloride, 2 mM TCEP, 100 % n/a n/a 90% H2O/10% D2O 70 mM 6.5 1 bar 298 Bruker AVANCE III 600 5 3D HBHA(CO)NH 380 uM [U-13C; U-15N] FOXO1 DBD, 20 mM sodium phosphate, 50 mM potassium chloride, 2 mM TCEP, 100 % n/a n/a 90% H2O/10% D2O 70 mM 6.5 1 bar 298 Bruker AVANCE III 600 6 3D HCCH-TOCSY 380 uM [U-13C; U-15N] FOXO1 DBD, 20 mM sodium phosphate, 50 mM potassium chloride, 2 mM TCEP, 100 % n/a n/a 90% H2O/10% D2O 70 mM 6.5 1 bar 298 Bruker AVANCE III 600 7 3D N-edited NOESY 380 uM [U-13C; U-15N] FOXO1 DBD, 20 mM sodium phosphate, 50 mM potassium chloride, 2 mM TCEP, 100 % n/a n/a 90% H2O/10% D2O 70 mM 6.5 1 bar 298 Bruker AVANCE III 850 8 3D C-edited NOESY 380 uM [U-13C; U-15N] FOXO1 DBD, 20 mM sodium phosphate, 50 mM potassium chloride, 2 mM TCEP, 100 % n/a n/a 90% H2O/10% D2O 70 mM 6.5 1 bar 298 Bruker AVANCE III 850
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600 2 Bruker AVANCE III 850
NMR Refinement Method Details Software molecular dynamics YASARA
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 30 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 2 chemical shift assignment Sparky Goddard, NMRFAM 3 refinement YASARA YASARA 4 processing TopSpin Bruker Biospin