6PPT

Structural Basis for Client Recognition and Activity of Hsp40 Chaperones


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-13C HSQC1 mM [U-13C; U-15N] PhoA-CBD1, 20 mM potassium phosphate, 75 mM potassium chloride, 0.04 % sodium azide90% H2O/10% D2O120 mM7.01 atm298Bruker AVANCE NEO 700
22D 1H-15N HSQC1 mM [U-13C; U-15N] PhoA-CBD1, 20 mM potassium phosphate, 75 mM potassium chloride, 0.04 % sodium azide90% H2O/10% D2O120 mM7.01 atm298Bruker AVANCE NEO 700
33D HNCACB1 mM [U-13C; U-15N] PhoA-CBD1, 20 mM potassium phosphate, 75 mM potassium chloride, 0.04 % sodium azide90% H2O/10% D2O120 mM7.01 atm298Bruker AVANCE NEO 700
43D 1H-15N NOESY1 mM [U-13C; U-15N] PhoA-CBD1, 20 mM potassium phosphate, 75 mM potassium chloride, 0.04 % sodium azide90% H2O/10% D2O120 mM7.01 atm298Bruker AVANCE NEO 700
53D 1H-13C NOESY1 mM [U-13C; U-15N] PhoA-CBD1, 20 mM potassium phosphate, 75 mM potassium chloride, 0.04 % sodium azide90% H2O/10% D2O120 mM7.01 atm298Bruker AVANCE NEO 700
123D HBHA(CO)NH1 mM [U-13C; U-15N] PhoA-CBD1, 20 mM potassium phosphate, 75 mM potassium chloride, 0.04 % sodium azide90% H2O/10% D2O120 mM7.01 atm298Bruker AVANCE NEO 700
113D CCH-TOCSY1 mM [U-13C; U-15N] PhoA-CBD1, 20 mM potassium phosphate, 75 mM potassium chloride, 0.04 % sodium azide90% H2O/10% D2O120 mM7.01 atm298Bruker AVANCE NEO 700
103D HNCO1 mM [U-13C; U-15N] PhoA-CBD1, 20 mM potassium phosphate, 75 mM potassium chloride, 0.04 % sodium azide90% H2O/10% D2O120 mM7.01 atm298Bruker AVANCE NEO 700
93D CCH-NOESY1 mM [U-13C; U-15N] PhoA-CBD1, 20 mM potassium phosphate, 75 mM potassium chloride, 0.04 % sodium azide90% H2O/10% D2O120 mM7.01 atm298Bruker AVANCE NEO 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE NEO700
NMR Refinement
MethodDetailsSoftware
molecular dynamicsrestrained MDCNS
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read
2structure calculationCYANAGuntert, Mumenthaler and Wuthrich
3chemical shift assignmentPINEBahrami, Markley, Assadi, and Eghbalnia
4peak pickingSparkyGoddard & Kneller
5geometry optimizationTALOSCornilescu, Delaglio and Bax
6processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
7collectionTopSpin4.0Bruker Biospin