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Polypharmacology of Epacadostat: a Potent and Selective Inhibitor of the Tumor Associated Carbonic Anhydrases IX and XII
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 8 296 1.7 M sodium citrate, 50 mM Tris pH 8.0
Crystal Properties Matthews coefficient Solvent content 2.1 41.37
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.418 α = 90 b = 41.385 β = 104.54 c = 72.32 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS3 S 6M 2018-02-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM30A 0.826 ESRF BM30A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.15 41.06 94.9 11.39 3.26 81956
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.15 1.19
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.15 41.06 77585 3937 94.42 0.2437 0.24251 0.2402 0.26841 0.2692 RANDOM 19.944
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.7 0.23 -1.48 1.82
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.945 r_rigid_bond_restr 29.169 r_sphericity_free 23.094 r_dihedral_angle_4_deg 22.685 r_sphericity_bonded 17.627 r_dihedral_angle_3_deg 11.706 r_dihedral_angle_1_deg 5.883 r_scangle_other 4.659 r_long_range_B_other 4.417 r_long_range_B_refined 4.413
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.945 r_rigid_bond_restr 29.169 r_sphericity_free 23.094 r_dihedral_angle_4_deg 22.685 r_sphericity_bonded 17.627 r_dihedral_angle_3_deg 11.706 r_dihedral_angle_1_deg 5.883 r_scangle_other 4.659 r_long_range_B_other 4.417 r_long_range_B_refined 4.413 r_scbond_it 3.991 r_scbond_other 3.991 r_mcangle_it 2.36 r_mcangle_other 2.322 r_mcbond_it 1.929 r_mcbond_other 1.928 r_angle_refined_deg 1.166 r_angle_other_deg 0.7 r_chiral_restr 0.066 r_gen_planes_refined 0.006 r_gen_planes_other 0.006 r_bond_refined_d 0.004 r_bond_other_d 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2059 Nucleic Acid Atoms Solvent Atoms 196 Heterogen Atoms 26
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling REFMAC phasing