Experiment: 6HBZ

X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP	5.5	291	0.2M KBr, 0.1M sodium acetate, 15% PEG 4000

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 176.776	α = 90
b = 176.776	β = 90
c = 112.117	γ = 120

Symmetry
Space Group	P 65 2 2

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS 6M-F		2015-12-13	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	DIAMOND BEAMLINE I02	0.9795	Diamond	I02

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.79	153.09	100	0.121	0.123	0.02	0.998	20.4	37		97476

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.79	1.82	99.6		1.958	1.985	0.325	0.448		36.9

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	1.79	153.09	92403	5021	99.98	0.1811	0.1793	0.2155	RANDOM	35.3

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-1.51	-0.76		-1.51		4.9

RMS Deviations
Key	Refinement Restraint Deviation
r_sphericity_free	44.058
r_dihedral_angle_2_deg	31.115
r_sphericity_bonded	24.685
r_dihedral_angle_4_deg	17.436
r_dihedral_angle_3_deg	12.825
r_dihedral_angle_1_deg	5.902
r_rigid_bond_restr	1.632
r_angle_refined_deg	1.593
r_angle_other_deg	0.953
r_chiral_restr	0.097

RMS Deviations
Key	Refinement Restraint Deviation
r_sphericity_free	44.058
r_dihedral_angle_2_deg	31.115
r_sphericity_bonded	24.685
r_dihedral_angle_4_deg	17.436
r_dihedral_angle_3_deg	12.825
r_dihedral_angle_1_deg	5.902
r_rigid_bond_restr	1.632
r_angle_refined_deg	1.593
r_angle_other_deg	0.953
r_chiral_restr	0.097
r_bond_refined_d	0.011
r_gen_planes_refined	0.006
r_bond_other_d	0.002
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	4156
Nucleic Acid Atoms
Solvent Atoms	439
Heterogen Atoms	113

Software

Software
Software Name	Purpose
MOSFLM	data reduction
Aimless	data scaling
PHASER	phasing
REFMAC	refinement
PDB_EXTRACT	data extraction

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.