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Neisseria gonorrhoeae Adhesin Complex Protein
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 0.1M Potassium Thionate, 30% W/V PEG2000 MME, pH 7.5
Crystal Properties Matthews coefficient Solvent content 2.27 45.77
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 49.092 α = 90 b = 30.936 β = 103.47 c = 67.572 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 2M 2017-05-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 1.07227 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.65 32.88 99.9 14.4 7.6 12098
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.65 1.68 99.8 0.17 0.182 0.066 0.987 6.4 7.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.65 32.88 11478 617 99.9 0.12818 0.12535 0.1354 0.17944 0.1841 RANDOM 26.048
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.34 0.33 -4.52 1.81
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 46.97 r_sphericity_bonded 34.92 r_dihedral_angle_2_deg 29.96 r_dihedral_angle_3_deg 14.721 r_rigid_bond_restr 13.768 r_dihedral_angle_4_deg 11.772 r_long_range_B_refined 9.481 r_long_range_B_other 7.958 r_dihedral_angle_1_deg 7.286 r_scangle_other 5.664
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 46.97 r_sphericity_bonded 34.92 r_dihedral_angle_2_deg 29.96 r_dihedral_angle_3_deg 14.721 r_rigid_bond_restr 13.768 r_dihedral_angle_4_deg 11.772 r_long_range_B_refined 9.481 r_long_range_B_other 7.958 r_dihedral_angle_1_deg 7.286 r_scangle_other 5.664 r_scbond_other 5.428 r_scbond_it 5.386 r_mcangle_other 4.407 r_mcangle_it 4.4 r_mcbond_it 3.408 r_mcbond_other 3.377 r_angle_refined_deg 1.783 r_angle_other_deg 1.029 r_chiral_restr 0.102 r_bond_refined_d 0.015 r_gen_planes_refined 0.009 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 800 Nucleic Acid Atoms Solvent Atoms 145 Heterogen Atoms 1
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling MOLREP phasing