6GFT
Antinociceptive evaluation of cyriotoxin-1a, the first toxin purified from Cyriopagopus schioedtei spider venom
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H TOCSY | 6 mg/mL unlabeled cyriotoxin-1a | 90% H2O/10% D2O | 50 mM | 5.0 | 1 bar | 305 | Bruker AVANCE 700 |
2 | 2D DQF-COSY | 6 mg/mL unlabeled cyriotoxin-1a | 90% H2O/10% D2O | 50 mM | 5.0 | 1 bar | 305 | Bruker AVANCE 700 |
3 | 2D NOESY | 6 mg/mL unlabeled cyriotoxin-1a | 90% H2O/10% D2O | 50 mM | 5.0 | 1 bar | 305 | Bruker AVANCE 700 |
4 | 2D 1H-15N HSQC | 6 mg/mL unlabeled cyriotoxin-1a | 90% H2O/10% D2O | 50 mM | 5.0 | 1 bar | 305 | Bruker AVANCE 700 |
5 | 2D 1H-13C HSQC | 6 mg/mL unlabeled cyriotoxin-1a | 90% H2O/10% D2O | 50 mM | 5.0 | 1 bar | 305 | Bruker AVANCE III 500 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 700 |
2 | Bruker | AVANCE III | 500 |
NMR Refinement | ||
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Method | Details | Software |
molecular dynamics | SYBYL2.1.1 | SYBYL |
NMR Ensemble Information | |
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Conformer Selection Criteria | all calculated structures submitted |
Conformers Calculated Total Number | 20 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | chemical shift assignment | TopSpin | 3.2 | Bruker Biospin |
2 | structure calculation | SYBYL | 2.1.1 | Tripos |