6F7E

NMR solution structure of the cellulose-binding family 2 carbohydrate binding domain (CBM2) from ScLPMO10C


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC25 mM sodium phosphate, 25 mM sodium chloride, 0.5 mM [U-98% 15N] ScCBM290% H2O/10% D2O50 mM5.51 atm298Bruker AVANCE III 600
22D 1H-13C HSQC aliphatic25 mM sodium phosphate, 25 mM sodium chloride, 0.5 mM [U-98% 13C; U-98% 15N] ScCBM290% H2O/10% D2O50 mM5.51 atm298Bruker AVANCE III 600
32D 1H-13C HSQC aromatic25 mM sodium phosphate, 25 mM sodium chloride, 0.5 mM [U-98% 13C; U-98% 15N] ScCBM2100% D2O50 mM5.51 atm298Bruker AVANCE III 800
43D HNHA25 mM sodium phosphate, 25 mM sodium chloride, 0.5 mM [U-98% 15N] ScCBM290% H2O/10% D2O50 mM5.51 atm298Bruker AVANCE III 600
53D HNCO25 mM sodium phosphate, 25 mM sodium chloride, 0.5 mM [U-98% 13C; U-98% 15N] ScCBM290% H2O/10% D2O50 mM5.51 atm298Bruker AVANCE III 600
63D HN(CA)CO25 mM sodium phosphate, 25 mM sodium chloride, 0.5 mM [U-98% 13C; U-98% 15N] ScCBM290% H2O/10% D2O50 mM5.51 atm298Bruker AVANCE III 600
73D HNCA25 mM sodium phosphate, 25 mM sodium chloride, 0.5 mM [U-98% 13C; U-98% 15N] ScCBM290% H2O/10% D2O50 mM5.51 atm298Bruker AVANCE III 600
83D HN(COCA)CB25 mM sodium phosphate, 25 mM sodium chloride, 0.5 mM [U-98% 13C; U-98% 15N] ScCBM290% H2O/10% D2O50 mM5.51 atm298Bruker AVANCE III 600
93D HCCH-TOCSY25 mM sodium phosphate, 25 mM sodium chloride, 0.5 mM [U-98% 13C; U-98% 15N] ScCBM290% H2O/10% D2O50 mM5.51 atm298Bruker AVANCE III 600
102D CACO25 mM sodium phosphate, 25 mM sodium chloride, 0.5 mM [U-98% 13C; U-98% 15N] ScCBM2100% D2O50 mM5.51 atm298Bruker AVANCE III 600
112D CON25 mM sodium phosphate, 25 mM sodium chloride, 0.5 mM [U-98% 13C; U-98% 15N] ScCBM290% H2O/10% D2O50 mM5.51 atm298Bruker AVANCE III 600
123D 1H-15N NOESY25 mM sodium phosphate, 25 mM sodium chloride, 0.5 mM [U-98% 15N] ScCBM290% H2O/10% D2O50 mM5.51 atm298Bruker AVANCE III 800
133D 1H-15N NOESY aliphatic25 mM sodium phosphate, 25 mM sodium chloride, 0.5 mM [U-98% 13C; U-98% 15N] ScCBM2100% D2O50 mM5.51 atm298Bruker AVANCE III 800
143D 1H-15N NOESY aromatic25 mM sodium phosphate, 25 mM sodium chloride, 0.5 mM [U-98% 13C; U-98% 15N] ScCBM2100% D2O50 mM5.51 atm298Bruker AVANCE III 800
152D COSY25 mM sodium phosphate, 25 mM sodium chloride, 0.5 mM ScCBM2100% D2O50 mM5.51 atm298Bruker AVANCE III 800
162D NOESY25 mM sodium phosphate, 25 mM sodium chloride, 0.5 mM ScCBM2100% D2O50 mM5.51 atm298Bruker AVANCE III 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III800
2BrukerAVANCE III600
NMR Refinement
MethodDetailsSoftware
molecular dynamicsYASARA
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number256
Conformers Submitted Total Number20
Representative Model1 (target function)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingTopSpin3.5Bruker Biospin
2structure calculationCYANA3.97Guntert, Mumenthaler and Wuthrich
3chemical shift assignmentCARA1.5Keller and Wuthrich
4refinementYASARA14.6.23Elmar Krieger
6processingMddNMR2.0Orekhov, Jaravine, Mayzel and Kazimierczuk