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Structural insight into a promiscuous CE15 esterase from the marine bacterial metagenome
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 277 PEG 3350, 24%
NaCitrate, pH 6, 0.1 M
Crystal Properties Matthews coefficient Solvent content 3.07 59.97
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 110.212 α = 90 b = 110.212 β = 90 c = 78.666 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2015-01-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.1 0.91840, 1.28202 BESSY 14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 47 99.9 0.067 0.074 0.031 0.999 16.4 5.6 43689 25.48
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.94 100 0.593 0.652 0.27 0.646 5.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.9 47 41585 2077 99.85 0.1852 0.1832 0.1912 0.224 0.2308 RANDOM 33.169
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.21 -0.11 -0.21 0.69
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.543 r_dihedral_angle_4_deg 20.476 r_dihedral_angle_3_deg 15.067 r_dihedral_angle_1_deg 14.626 r_angle_refined_deg 2.004 r_angle_other_deg 1.149 r_chiral_restr 0.148 r_bond_refined_d 0.019 r_gen_planes_refined 0.01 r_bond_other_d 0.002
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.543 r_dihedral_angle_4_deg 20.476 r_dihedral_angle_3_deg 15.067 r_dihedral_angle_1_deg 14.626 r_angle_refined_deg 2.004 r_angle_other_deg 1.149 r_chiral_restr 0.148 r_bond_refined_d 0.019 r_gen_planes_refined 0.01 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3090 Nucleic Acid Atoms Solvent Atoms 315 Heterogen Atoms 6
Software Software Software Name Purpose REFMAC refinement Aimless data scaling PHASER phasing SOLVE phasing PDB_EXTRACT data extraction XDS data reduction