SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 300 uM [U-99% 15N] apo-Calmodulin, 300 uM Calcium Voltage Gated Channel 1.2 | 90% H2O/10% D2O | 100 mM | 6 | 1 atm | 303 | Bruker AVANCE III 600 |
| 2 | 2D 1H-15N HSQC | 300 uM [U-99% 15N] Calcium Voltage Gated Channel 1.2, 300 uM apo-Calmodulin | 90% H2O/10% D2O | 100 mM | 6 | 1 atm | 303 | Bruker AVANCE III 600 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE III | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | used with all structures along with rigid docking | HADDOCK |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | l |
| Conformers Calculated Total Number | 200 |
| Conformers Submitted Total Number | 4 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | peak picking | Sparky | Goddard | |
| 2 | structure calculation | HADDOCK | Bonvin | |
| 3 | chemical shift assignment | NMRDraw | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
| 4 | refinement | PALES | Markus Zweckstetter and Ad Bax | |
