6CL3

LyeTxI-b, a synthetic peptide derived from Lycosa erythrognatha spider venom, shows potent antibiotic activity, in vitro and in vivo


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H TOCSY2 mM LyeTxI-b, 20 mM phosphate buffer, 1 mM DSSTFE-d2/H2O (60:40%, v/v)not applicable7.01 atm293Bruker Avance III 600 600.043
22D 1H-1H NOESY2 mM LyeTxI-b, 20 mM phosphate buffer, 1 mM DSSTFE-d2/H2O (60:40%, v/v)not applicable7.01 atm293Bruker Avance III 600 600.043
32D 1H-13C HSQC2 mM LyeTxI-b, 20 mM phosphate buffer, 1 mM DSSTFE-d2/H2O (60:40%, v/v)not applicable7.01 atm293Bruker Avance III 600 600.043
42D 1H-15N HMQC2 mM LyeTxI-b, 20 mM phosphate buffer, 1 mM DSSTFE-d2/H2O (60:40%, v/v)not applicable7.01 atm293Bruker Avance III 600 600.043
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance III 600600.043
NMR Refinement
MethodDetailsSoftware
simulated annealingX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentNMRViewJohnson, One Moon Scientific
2processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5collectionTOPSPINBruker Biospin
3refinementX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
4data analysisMolmolKoradi, Billeter and Wuthrich
6structure calculationTALOSCornilescu, Delaglio and Bax
7structure calculationX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore