6BY4
Single-State 14-mer UUCG Tetraloop calculated from Exact NOEs
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D WaterGate [1H-1H] NOESY buildup series | 20 mM None KHPO4, 0.4 mM None EDTA, 1 mM None 14-mer UUCG Tetraloop | 95% H2O/5% D2O | 20 mM | 6.4 | 1 atm | 298 | Varian Varian Direct Drive 900 |
| 2 | 2D PreSat [1H-1H] NOESY buildup series | 20 mM None KHPO4, 0.4 mM None EDTA, 1.7 mM None 14-mer UUCG Tetraloop | 100% D2O | 20 mM | 6.4 | 1 atm | 298 | Varian Varian Direct Drive 900 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | Varian Direct Drive | 900 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics | CYANA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | target function |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (target function) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
| 2 | peak picking | CcpNMR | CCPN | |
| 3 | data analysis | CYANA | 3.98 | Guntert, Mumenthaler and Wuthrich |
| 4 | refinement | CYANA | 3.98 | Guntert, Mumenthaler and Wuthrich |
| 5 | structure calculation | CYANA | 3.98 | Guntert, Mumenthaler and Wuthrich |
