☰ Navigation Tabs
Crystal structure of GSK3beta complexed with Morin
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 290 100mM Sodium Citrate (pH6.5), 18%(v/v) PEG 4000, 5%(v/v) 2-propanol
Crystal Properties Matthews coefficient Solvent content 2.37 48.02
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 67.588 α = 90 b = 134.36 β = 103.8 c = 100.393 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 83 CCD RIGAKU 2015-06-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PAL/PLS BEAMLINE 4A 0.987 PAL/PLS 4A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.14 50 97.8 38.17 6 93509
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.14 2.18
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.14 40 88879 4608 97.64 0.19236 0.1906 0.22626 0.2246 RANDOM 45.981
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.87 1.2 0.74 -0.41
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.22 r_dihedral_angle_4_deg 21.555 r_dihedral_angle_3_deg 16.678 r_long_range_B_refined 9.043 r_long_range_B_other 9.035 r_scangle_other 6.078 r_mcangle_it 5.606 r_mcangle_other 5.606 r_dihedral_angle_1_deg 5.199 r_scbond_it 4.171
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.22 r_dihedral_angle_4_deg 21.555 r_dihedral_angle_3_deg 16.678 r_long_range_B_refined 9.043 r_long_range_B_other 9.035 r_scangle_other 6.078 r_mcangle_it 5.606 r_mcangle_other 5.606 r_dihedral_angle_1_deg 5.199 r_scbond_it 4.171 r_scbond_other 4.168 r_mcbond_it 3.934 r_mcbond_other 3.932 r_angle_refined_deg 1.485 r_angle_other_deg 0.969 r_chiral_restr 0.076 r_bond_refined_d 0.011 r_gen_planes_refined 0.007 r_bond_other_d 0.003 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 10463 Nucleic Acid Atoms Solvent Atoms 422 Heterogen Atoms 68
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling MOLREP phasing