5ZVN

Structure of [beta Glc-T9,K7]indolicidin, a glycosylated analogue of indolicidin


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H TOCSY2 mM Peptide90% H2O/10% D2O0.03 mM4.71 atm310Bruker AVANCE III 500.15
52D 1H-1H NOESY2 mM Peptide90% H2O/10% D2O0.03 mM4.71 atm310Bruker AVANCE III 500.15
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III500.15
NMR Refinement
MethodDetailsSoftware
distance geometryAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentCARAKeller and Wuthrich
2chemical shift calculationCARAKeller and Wuthrich
3collectionTopSpinBruker Biospin
4peak pickingCARAKeller and Wuthrich
5data analysisCARAKeller and Wuthrich
6refinementAmberCase, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
7structure calculationCYANAGuntert, Mumenthaler and Wuthrich