X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP829320-30 % (w/v) PEG 8000 and 50 mM Tris-HCl buffer (pH 8)
Crystal Properties
Matthews coefficientSolvent content
2.3848.33

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 86.6α = 90
b = 103.1β = 90
c = 151.8γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152011-04-09MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID23-10.99987ESRFID23-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1248.81298.60.0915.597.7291103

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT248.8186547455698.610.160040.157730.20422RANDOM29.472
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.74-0.09-0.65
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.679
r_dihedral_angle_4_deg17.455
r_dihedral_angle_3_deg13.985
r_long_range_B_refined8.184
r_long_range_B_other8.184
r_dihedral_angle_1_deg6.278
r_scangle_other5.738
r_mcangle_other3.943
r_mcangle_it3.942
r_scbond_it3.695
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.679
r_dihedral_angle_4_deg17.455
r_dihedral_angle_3_deg13.985
r_long_range_B_refined8.184
r_long_range_B_other8.184
r_dihedral_angle_1_deg6.278
r_scangle_other5.738
r_mcangle_other3.943
r_mcangle_it3.942
r_scbond_it3.695
r_scbond_other3.695
r_mcbond_it2.651
r_mcbond_other2.649
r_angle_refined_deg1.727
r_angle_other_deg1.064
r_chiral_restr0.104
r_bond_refined_d0.018
r_gen_planes_refined0.008
r_bond_other_d0.002
r_gen_planes_other0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms9939
Nucleic Acid Atoms
Solvent Atoms733
Heterogen Atoms56

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XSCALEdata scaling
MOLREPphasing