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crystal structure of mPGES-1 bound to inhibitor
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 294.15 0.1M TRIS pH 8.9
28% PEG 1K
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 77.318 α = 90 b = 77.318 β = 90 c = 122.954 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 78.15 CCD RAYONIX MX-225 2014-12-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 31-ID 0.97931 APS 31-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.2 19.54 98.6 0.1 7.6 5.4 80353
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.2 1.26 93.9 0.65 3.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.2 19.54 80353 4300 98.7 0.1528 0.152 0.1566 0.16801 0.1702 RANDOM 19.267
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.1 0.05 0.1 -0.34
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 42.895 r_dihedral_angle_2_deg 39.793 r_sphericity_bonded 16.348 r_dihedral_angle_4_deg 12.426 r_dihedral_angle_3_deg 11.978 r_long_range_B_refined 4.786 r_dihedral_angle_1_deg 3.965 r_scbond_it 3.884 r_mcangle_it 2.167 r_mcbond_it 2.128
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 42.895 r_dihedral_angle_2_deg 39.793 r_sphericity_bonded 16.348 r_dihedral_angle_4_deg 12.426 r_dihedral_angle_3_deg 11.978 r_long_range_B_refined 4.786 r_dihedral_angle_1_deg 3.965 r_scbond_it 3.884 r_mcangle_it 2.167 r_mcbond_it 2.128 r_angle_refined_deg 1.114 r_rigid_bond_restr 0.359 r_chiral_restr 0.071 r_bond_refined_d 0.006 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1175 Nucleic Acid Atoms Solvent Atoms 137 Heterogen Atoms 127
Software Software Software Name Purpose REFMAC refinement iMOSFLM data reduction SCALA data scaling PHASER phasing