X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP4.8293.1534% PEG2000 MME, 0.2M lithium salicylate, 0.1M ammonium sulfate, 0.1M sodium acetate pH 4.8
Crystal Properties
Matthews coefficientSolvent content
1.9637.31

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 40.728α = 89.92
b = 43.149β = 91.86
c = 51.744γ = 90.01
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 6M2015-06-23MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONBESSY BEAMLINE 14.10.9797BESSY14.1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.5640.7196.330.07770.99613.334.14736824.363
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.561.61493.310.41560.9212.734.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.5640.7147368108096.020.152730.152220.17523RANDOM24.363
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
17.743.42-1.01-0.771.91-16.97
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.746
r_dihedral_angle_3_deg14.305
r_dihedral_angle_1_deg6.128
r_long_range_B_refined5.931
r_long_range_B_other5.93
r_scangle_other3.835
r_mcangle_it3.299
r_mcangle_other3.299
r_scbond_it2.546
r_scbond_other2.546
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.746
r_dihedral_angle_3_deg14.305
r_dihedral_angle_1_deg6.128
r_long_range_B_refined5.931
r_long_range_B_other5.93
r_scangle_other3.835
r_mcangle_it3.299
r_mcangle_other3.299
r_scbond_it2.546
r_scbond_other2.546
r_mcbond_it2.15
r_mcbond_other2.141
r_angle_refined_deg1.842
r_angle_other_deg1.015
r_chiral_restr0.115
r_bond_refined_d0.016
r_gen_planes_refined0.009
r_bond_other_d0.002
r_gen_planes_other0.002
r_dihedral_angle_4_deg
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3007
Nucleic Acid Atoms
Solvent Atoms331
Heterogen Atoms32

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XDSdata scaling
AutoSolphasing