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Extended catalytic domain of H. jecorina LPMO9A a.k.a EG4
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4 293 1.6M AmSO4
0.1M Citric Acid pH 4.0
Crystal Properties Matthews coefficient Solvent content 2.25 45.43
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.82 α = 90 b = 61.55 β = 112.03 c = 47.78 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2013-11-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 0.972425 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 0.95 44.3 99 0.074 0.083 0.036 0.78 14.1 4.3 121945
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 0.9 0.95 0.679 0.78 0.375
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 0.95 44.29 121945 6451 89.04 0.11582 0.1152 0.125 0.12741 0.1364 RANDOM 8.086
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.19 -0.07 -0.25 0.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.932 r_sphericity_free 23.633 r_dihedral_angle_4_deg 14.443 r_dihedral_angle_3_deg 10.236 r_dihedral_angle_1_deg 9.623 r_sphericity_bonded 6.968 r_rigid_bond_restr 2.606 r_long_range_B_refined 2.445 r_angle_refined_deg 1.832 r_long_range_B_other 1.787
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.932 r_sphericity_free 23.633 r_dihedral_angle_4_deg 14.443 r_dihedral_angle_3_deg 10.236 r_dihedral_angle_1_deg 9.623 r_sphericity_bonded 6.968 r_rigid_bond_restr 2.606 r_long_range_B_refined 2.445 r_angle_refined_deg 1.832 r_long_range_B_other 1.787 r_scbond_it 1.406 r_angle_other_deg 1.386 r_scangle_other 1.232 r_scbond_other 1.025 r_mcangle_it 0.892 r_mcangle_other 0.892 r_mcbond_it 0.66 r_mcbond_other 0.655 r_chiral_restr 0.11 r_bond_refined_d 0.014 r_gen_planes_refined 0.012 r_bond_other_d 0.003 r_gen_planes_other 0.003 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1848 Nucleic Acid Atoms Solvent Atoms 372 Heterogen Atoms 209
Software Software Software Name Purpose REFMAC refinement XDS data reduction SCALA data scaling MOLREP phasing