X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP293PEG4000
Crystal Properties
Matthews coefficientSolvent content
2.5752.24

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 232.913α = 90
b = 100.737β = 102.03
c = 59.045γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 6MLN2 cooled fixed-exit Si(111) monochromator, Dynamically bendable mirror, KB mirror pair2014-08-18MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X6A0.99999NSLSX6A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.52113.996.50.0613.642.943635
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.522.7797.50.5562.9

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.52113.94264499196.570.228220.226950.28085RANDOM80.783
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-3.7-0.84-2.285.81
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.145
r_dihedral_angle_4_deg15.358
r_dihedral_angle_3_deg13.515
r_long_range_B_refined7.22
r_long_range_B_other7.219
r_dihedral_angle_1_deg6.788
r_mcangle_it5.301
r_mcangle_other5.301
r_scangle_other5.269
r_scbond_it3.569
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.145
r_dihedral_angle_4_deg15.358
r_dihedral_angle_3_deg13.515
r_long_range_B_refined7.22
r_long_range_B_other7.219
r_dihedral_angle_1_deg6.788
r_mcangle_it5.301
r_mcangle_other5.301
r_scangle_other5.269
r_scbond_it3.569
r_scbond_other3.569
r_mcbond_it3.516
r_mcbond_other3.516
r_angle_refined_deg1.232
r_angle_other_deg0.899
r_chiral_restr0.071
r_bond_refined_d0.007
r_gen_planes_refined0.004
r_bond_other_d0.002
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms8960
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms57

Software

Software
Software NamePurpose
XDSdata reduction
XSCALEdata scaling
REFMACrefinement