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NMR solution structure of Helicobacter pylori TonB-CTD (residues 194-285)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D HNCA 0.5 mM [U-100% 13C; U-100% 15N] TonB CTD 90% H2O/10% D2O 0.02 mM 6 1 atm 298 Bruker AVANCE III 850 2 2D 1H-15N HSQC 0.5 mM [U-100% 13C; U-100% 15N] TonB CTD 90% H2O/10% D2O 0.02 mM 6 1 atm 298 Bruker AVANCE III 850 3 3D HNCO 0.5 mM [U-100% 13C; U-100% 15N] TonB CTD 90% H2O/10% D2O 0.02 mM 6 1 atm 298 Bruker AVANCE III 850 4 3D HNCACB 0.5 mM [U-100% 13C; U-100% 15N] TonB CTD 90% H2O/10% D2O 0.02 mM 6 1 atm 298 Bruker AVANCE III 850 5 3D HN(CO)CA 0.5 mM [U-100% 13C; U-100% 15N] TonB CTD 90% H2O/10% D2O 0.02 mM 6 1 atm 298 Bruker AVANCE III 850 9 3D 1H-15N TOCSY 0.5 mM [U-100% 13C; U-100% 15N] TonB CTD 90% H2O/10% D2O 0.02 mM 6 1 atm 298 Bruker AVANCE III 850 8 3D CBCA(CO)NH 0.5 mM [U-100% 13C; U-100% 15N] TonB CTD 90% H2O/10% D2O 0.02 mM 6 1 atm 298 Bruker AVANCE III 850 7 3D 1H-15N NOESY 0.5 mM [U-100% 13C; U-100% 15N] TonB CTD 90% H2O/10% D2O 0.02 mM 6 1 atm 298 Bruker AVANCE III 850 6 3D 1H-13C NOESY aliphatic 0.5 mM [U-100% 13C; U-100% 15N] TonB CTD 90% H2O/10% D2O 0.02 mM 6 1 atm 298 Bruker AVANCE III 850 11 3D HCCH-COSY 0.5 mM [U-100% 13C; U-100% 15N] TonB CTD 90% H2O/10% D2O 0.02 mM 6 1 atm 298 Bruker AVANCE III 850 10 2D 1H-13C HSQC 0.5 mM [U-100% 13C; U-100% 15N] TonB CTD 90% H2O/10% D2O 0.02 mM 6 1 atm 298 Bruker AVANCE III 850 13 3D H(CCO)NH 0.5 mM [U-100% 13C; U-100% 15N] TonB CTD 90% H2O/10% D2O 0.02 mM 6 1 atm 298 Bruker AVANCE III 850 12 3D HNCA 0.5 mM [U-100% 13C; U-100% 15N] TonB CTD 90% H2O/10% D2O 0.02 mM 6 1 atm 298 Bruker AVANCE III 850 14 3D HBHA(CO)NH 0.5 mM [U-100% 13C; U-100% 15N] TonB CTD 90% H2O/10% D2O 0.02 mM 6 1 atm 298 Bruker AVANCE III 850
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 850
NMR Refinement Method Details Software molecular dynamics Amber
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 11 (lowest energy)
Additional NMR Experimental Information Details 3D 1H-15N NOESY and 3D 1H-13C NOESY spectra were recorded with a mixing time of 90 ms.
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment CcpNmr Analysis 2.4.1 CCPN 5 structure calculation CYANA 3.0 Guntert, Mumenthaler and Wuthrich 6 refinement Amber 14.0 Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman 2 data analysis PSVS 1.5 Bhattacharya and Montelione 7 chemical shift assignment TALOS