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Crystal structure of the Rous sarcoma virus matrix protein (aa 2-102). Space group I4122
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 9.1 291.15 0.6 M Malonic acid /KOH pH 9.1, 0.1 M Boric acid /KOH pH 9.1
Crystal Properties Matthews coefficient Solvent content 5.65 78.23
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 67.392 α = 90 b = 67.392 β = 90 c = 220.769 γ = 90
Symmetry Space Group I 41 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 IMAGE PLATE MAR scanner 345 mm plate 2007-10-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 HF 1.54179
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.2 49.7 99.9 0.132 22.2 10.1 4535
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 3.2 49.7 4279 231 99.73 0.20424 0.20193 0.2045 0.24851 0.2428 RANDOM 74.738
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 4.94 4.94 -9.87
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.183 r_dihedral_angle_4_deg 29.18 r_dihedral_angle_3_deg 19.327 r_long_range_B_refined 12.437 r_long_range_B_other 12.431 r_scangle_other 7.944 r_mcangle_other 7.391 r_mcangle_it 7.39 r_dihedral_angle_1_deg 5.574 r_scbond_it 5.099
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.183 r_dihedral_angle_4_deg 29.18 r_dihedral_angle_3_deg 19.327 r_long_range_B_refined 12.437 r_long_range_B_other 12.431 r_scangle_other 7.944 r_mcangle_other 7.391 r_mcangle_it 7.39 r_dihedral_angle_1_deg 5.574 r_scbond_it 5.099 r_scbond_other 5.089 r_mcbond_it 4.573 r_mcbond_other 4.56 r_angle_refined_deg 1.695 r_angle_other_deg 0.964 r_chiral_restr 0.069 r_bond_refined_d 0.013 r_gen_planes_refined 0.005 r_bond_other_d 0.004 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 776 Nucleic Acid Atoms Solvent Atoms 6 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling Coot model building PHASER phasing