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Dihydrodipicolinate reductase from the industrial and evolutionarily important cyanobacteria Anabaena variabilis.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 281 21% PEG3350, 0.2 M lithium sulphate, 0.1 M bis-tris chloride pH 5.5.
Crystal Properties Matthews coefficient Solvent content 2.35 47.74
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 72.728 α = 90 b = 89.361 β = 90 c = 95.917 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2014-02-05 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX2 0.9537 Australian Synchrotron MX2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.82 55.5 99.7 25.76 14.18 7762
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.83 2.899 7280 452 99.36 0.18629 0.18263 0.1863 0.24346 0.2477 RANDOM 42.395
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.32 0.01 -0.34
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.44 r_dihedral_angle_4_deg 19.356 r_dihedral_angle_3_deg 17.688 r_dihedral_angle_1_deg 7.195 r_long_range_B_refined 7.06 r_long_range_B_other 7.059 r_scangle_other 4.553 r_mcangle_it 4.422 r_mcangle_other 4.421 r_scbond_it 2.677
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.44 r_dihedral_angle_4_deg 19.356 r_dihedral_angle_3_deg 17.688 r_dihedral_angle_1_deg 7.195 r_long_range_B_refined 7.06 r_long_range_B_other 7.059 r_scangle_other 4.553 r_mcangle_it 4.422 r_mcangle_other 4.421 r_scbond_it 2.677 r_scbond_other 2.676 r_mcbond_it 2.674 r_mcbond_other 2.673 r_angle_refined_deg 1.503 r_angle_other_deg 0.813 r_chiral_restr 0.072 r_bond_refined_d 0.011 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2040 Nucleic Acid Atoms Solvent Atoms 1 Heterogen Atoms 1
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling PHASER phasing