X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP2937 mg/mL protein in 0.1 M MES pH 6.0 to 7.0 and 16% to 23% w/v PEG 3350
Crystal Properties
Matthews coefficientSolvent content
2.3848.31

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 81.748α = 90
b = 80.15β = 91.91
c = 157.616γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDBruker Platinum 135Helios mirrors2014-10-13MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODEBRUKER AXS MICROSTAR1.54188

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.795099.80.094811.617.75191803
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.791.8998.80.72251.485.32

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.79157.53182014930599.530.168110.165640.21676RANDOM24.592
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.97-0.570.470.53
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.89
r_dihedral_angle_4_deg19.966
r_dihedral_angle_3_deg15.418
r_dihedral_angle_1_deg7.021
r_long_range_B_refined6.731
r_long_range_B_other6.545
r_scangle_other3.129
r_mcangle_it2.55
r_mcangle_other2.55
r_angle_refined_deg2.085
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.89
r_dihedral_angle_4_deg19.966
r_dihedral_angle_3_deg15.418
r_dihedral_angle_1_deg7.021
r_long_range_B_refined6.731
r_long_range_B_other6.545
r_scangle_other3.129
r_mcangle_it2.55
r_mcangle_other2.55
r_angle_refined_deg2.085
r_scbond_it1.969
r_scbond_other1.969
r_mcbond_it1.524
r_mcbond_other1.523
r_angle_other_deg1.089
r_chiral_restr0.149
r_bond_refined_d0.024
r_gen_planes_refined0.015
r_bond_other_d0.002
r_gen_planes_other0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms14440
Nucleic Acid Atoms
Solvent Atoms2077
Heterogen Atoms194

Software

Software
Software NamePurpose
REFMACrefinement
PROTEUM PLUSdata collection
MOLREPphasing